Raoultella terrigena: NCTC13098_01894
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Entry
NCTC13098_01894 CDS
T06046
Symbol
xynB_1
Name
(GenBank) Beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rtg
Raoultella terrigena
Pathway
rtg00520
Amino sugar and nucleotide sugar metabolism
rtg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rtg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
NCTC13098_01894 (xynB_1)
Enzymes [BR:
rtg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
NCTC13098_01894 (xynB_1)
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
VDR25565
UniProt:
A0A3P8KA37
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Position
1:1548063..1549661
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AA seq
532 aa
AA seq
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MTLIQNPVLPGFNADPSIIRVDDTYYIANSTFEWFPGVRLHESKDLQHWDLLPSPLSTTA
LLDMKGNPSSGGIWAPALSHADGKFWLVYTDVKITEGAFKDMTNYLTTATDIRGPWSDPI
KLNGVGFDASLFHDDDGRKYIVQQTWDHREYHHPFDGITLTELDTRTLKLKPETARTLYR
GTAVALVEGPHLYKLNGYYYLFAAQGGTVFTHQEVVARSKTLDAHSFTTAPGEVFLTNVD
TPDSYIQKQGHGSLVSTPAGEWYYASLCARPWNRPGESVYDPRGWSTLGRETSIQKVYWD
EEGWPRVEGGHGGKTFVEGPEDAIYTDSATDHSQHDAFTTSTLDRNWNTLRVPFTKKMGT
TGDGKLTLIGQGSLANTHDLSLIARRWQAFYFDAQVKVKFNPFSYQQMAGLTNFYNDRHW
SFVFITWNEINGSVIEIGENNRGKYTSYLKDDAIKIPEGIEYVWFRTKVRKQTYSYEYSF
DGVNFTEIPVTLDAAILSDDYVLQSYGGFFTGAFVGLAAVDYSGYEVSADFL
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgactcttattcaaaaccctgtgttacctggatttaatgcggaccccagtattatccgc
gtagatgacacctactatatcgcaaactctacatttgagtggttccctggcgtgcgttta
catgaatcaaaggacctgcagcactgggatcttctccccagtcccttgtccacaaccgcg
ctgttagatatgaaaggcaacccttcatcaggtggcatttgggctccggcgctttctcat
gctgatggcaaattctggctagtgtatacggatgtgaaaatcacagaaggtgcctttaaa
gacatgaccaactatctgaccaccgcgacggatattcgtggtccatggtcagatcctatc
aaactgaatggcgtgggcttcgatgcttcgctgttccatgacgatgacgggcgtaaatat
atcgttcagcaaacctgggaccatcgagagtatcatcaccccttcgatggcattacgtta
actgaacttgatacccggacattaaagttaaaaccggaaacagcacgaaccctctatcgc
ggcactgccgttgcgcttgtcgaggggccacacctctacaaactgaacggatattattat
cttttcgccgctcagggagggaccgtattcacccatcaggaggttgtcgcgcgttctaag
accttagatgcccacagttttaccacggcaccgggagaagtttttctaaccaacgtcgat
acgccggacagctacatccagaagcagggccacggttctttggtttcaacgcctgctggc
gaatggtattacgcttcgctctgcgcgcgtccgtggaatcgcccaggcgagtctgtctac
gatcctcgcggctggtcaacgctgggcagagaaacgtcgatccaaaaagtgtactgggat
gaagaaggctggccgcgtgttgaaggcggccacggtggaaaaacgtttgttgaaggccca
gaggatgccatttacaccgacagcgcaacagaccacagtcagcatgatgcgtttacaacg
tcgacgctcgatcgcaactggaatacgctccgtgttccgttcaccaaaaaaatgggtacc
acaggcgatggcaaactgacgttgattggtcagggttctttagcgaatacccatgacctg
tcgctgattgcccgacgttggcaagccttctattttgatgcccaggttaaggtcaaattt
aacccattcagctatcagcaaatggcagggttaacgaatttctacaacgaccgccactgg
agttttgtgttcatcacctggaatgaaattaatggctcagttatcgaaataggtgaaaat
aatcgcgggaaatacacctcttatttaaaagatgatgccatcaagatccccgaaggtatc
gagtatgtctggttccgcactaaagttcgcaaacaaacgtacagctatgaatacagcttt
gacggtgtcaatttcactgaaattcctgtcacattagatgccgcaattctttcagatgat
tatgtcctgcaaagctatggcgggttctttaccggggcattcgttggcctggcggcagtc
gactactctggctatgaggtcagcgcagattttttatga
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