Rhodanobacter thiooxydans: LRK53_06600
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Entry
LRK53_06600 CDS
T08065
Name
(GenBank) polyprenyl synthetase family protein
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00900
Terpenoid backbone biosynthesis
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
Module
rth_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LRK53_06600
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rth01006
]
LRK53_06600
Enzymes [BR:
rth01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LRK53_06600
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LRK53_06600
Prenyltransferases [BR:
rth01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LRK53_06600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-ProteinID:
UJJ56039
LinkDB
All DBs
Position
complement(1495468..1496367)
Genome browser
AA seq
299 aa
AA seq
DB search
MNPNSELGPALQSLIGRTEQALDRHLPPAGQSPTELHRAMRYAVLGGGKRLRPLLVYATA
HALGEDGPQLDAAACAVELIHAYSLVHDDLPAMDDDALRRGRPTCHVVFGEAMAILAGDA
LQALAFEILADHAGDSADAATGIAMLRALGRACGAEGMAGGQALDLAAVGQALTLGELEH
MHACKTGALIRASVHLGALAAGTGDSTLHALDRYAHAVGLAFQVRDDILDVEGESAVIGK
TAGKDAAAAKPTFPSIIGLDASRARLAELTDTALAAVAPLGNRAALLEELARYAAHRRY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ttgaacccgaactctgagctgggtcccgcgctgcagtcgctgatcgggcgcaccgaacag
gcactcgaccgccacctgccgccagccgggcaatcccccaccgaactgcatcgcgcgatg
cgctacgccgtgcttggtggcggcaagcggctgcgcccgctgctggtctacgccaccgcg
cacgccctgggcgaagacgggccgcaactggatgccgctgcctgcgcggtggagctgatc
cacgcctattcgctggtgcacgacgacctgccggcgatggacgacgacgcgctgcgccgc
ggccgcccgacctgccatgtcgtgttcggcgaggcgatggcgatcctcgccggcgacgcg
ctgcaggcgctggcattcgagatcctcgccgaccatgccggtgacagcgctgacgcagcc
accggcatcgccatgctgcgcgcgctgggccgcgcctgcggcgccgagggcatggccggc
ggccaggcactggacctggcggcggtcggccaggcgctcacgctgggcgaactggagcac
atgcacgcctgcaagaccggcgcgctgatccgcgcctcggtgcacctcggcgcgctcgcc
gccggcaccggcgacagtacgctgcacgcgctggaccgctacgcccacgcggtcggcctg
gccttccaggtacgcgacgacatcctcgacgtggaaggcgaatcggcggtgatcggcaag
accgccggcaaggacgccgccgccgccaagcccaccttcccctcgatcatcggcctcgac
gcctcgcgcgcgcggctggccgaactcaccgacaccgcgctggccgcggtcgcgccgctg
ggcaatcgtgcggcgctgctggaagaactggcgcggtacgccgcccaccgccgctactga
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