Rhodanobacter thiooxydans: LRK53_16265
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Entry
LRK53_16265 CDS
T08065
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00300
Lysine biosynthesis
rth00550
Peptidoglycan biosynthesis
rth01100
Metabolic pathways
rth01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRK53_16265
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LRK53_16265
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LRK53_16265
Enzymes [BR:
rth01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
LRK53_16265
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
UJJ54490
LinkDB
All DBs
Position
complement(3581527..3582900)
Genome browser
AA seq
457 aa
AA seq
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MMKLAAIALWTHGCLFGSDVEVTGVAIDTRKLKPGDLFVAIRGERVDGHDYLAEAAARGA
VAALVTRKVDSALPQLLVDNTELALGDLASAVRAQRNVRVVGITGSNGKTTVKTLVASIL
SRHGRTHVSAGNFNNELGLPLSLLAMPPDTGYAVFEMGAGKPGDIAYLAAIARPDIGLVT
LIAPAHLARMGSIEGVAETKGALYQSLPADGIAIINADDAFASFFAGLAGARRVLRFGLE
QPADVGADIVEQRVDGSRFVLSTPQGDAEVALPLPGRHNIANALAATAVALALEVPLGTI
VAGLEQVPGVAGRLRRETMTGGWTLIDDSYNANPSSMAAAIDTLLLAGGERWLVLGDMAE
LGPDARALHAGIGVRARERGVERLFAVGPLGVATVEAFGAGGEHFEDKAALIAVLQAQLH
AGVTCLVKGSRSAGMEQVVVALGGHAGKNKGDASDAA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgatgaagctcgccgccatcgcgctgtggacccatggctgcctgttcggcagcgacgtc
gaggtgaccggcgtcgccatcgacacgcgcaagctcaagcccggcgacctgttcgtggcg
atcaggggcgagcgggtggatggccacgattacctggccgaggccgccgcgcgcggcgcg
gtcgctgcgctggtgacgcgcaaggtcgacagcgcgctgccgcagctgctggtagacaac
acggaactggccctcggcgacctggccagtgcggtgcgcgcccagcgcaacgtgcgcgtg
gtcggcatcaccggctccaacggcaagaccacggtgaagacgctggtcgcctcgatcctg
tcgcggcacggccgcacccacgtcagcgccggcaacttcaacaatgaactgggcctgccg
ctgagcctgctggcgatgccgccggacaccggatacgcggtgttcgagatgggtgccggc
aagccgggcgacatcgcctacctggccgccatcgcgcggcccgatatcggcctcgtcacg
ctcatcgcgccggcgcatcttgcgcgcatgggcagcatcgagggcgtggccgagaccaag
ggcgcgctataccagtctttgccggccgatggcatcgcgatcatcaacgccgacgacgcg
ttcgccagcttcttcgccggcctggccggcgcgcgccgcgtgctgcgcttcggcctcgag
cagccggccgacgtcggcgccgacatcgtcgagcagcgcgtggacggctcgcgcttcgtg
ctcagcacgccacagggcgatgccgaagtggcgctgccgctgcccggccgccacaacatc
gccaacgcgctggcggccacggcggtggcgctggcgctggaggtgccgctgggcaccatc
gtggccgggctggagcaggtgcccggcgtggccggccggctgcgccgtgaaacgatgact
ggcggctggacgctgatcgacgacagctacaacgcgaacccgagctcgatggcggcggcg
atcgacaccttgctgctggccggcggtgaacgctggctggtgctgggcgacatggccgag
ctgggccccgacgcgcgagcgctgcacgccggcatcggcgtgcgggcgcgcgagcgcggg
gtcgagcggctgttcgccgtcggtccgctcggcgtggccacggtcgaggcgttcggcgcg
ggcggcgagcatttcgaggacaaggcggcgctgatcgccgtgctgcaggcgcaactgcac
gcgggcgtcacctgcctggtgaagggctcgcgctcggccggcatggagcaggtggtggtg
gcgctcggcggtcatgccggcaagaacaagggggacgcatccgatgctgcttga
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