Rhodanobacter thiooxydans: LRK53_17950
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Entry
LRK53_17950 CDS
T08065
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
rth
Rhodanobacter thiooxydans
Pathway
rth00330
Arginine and proline metabolism
rth01100
Metabolic pathways
rth01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rth00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LRK53_17950 (speA)
Enzymes [BR:
rth01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
LRK53_17950 (speA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
UJJ54792
LinkDB
All DBs
Position
complement(3942809..3944695)
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AA seq
628 aa
AA seq
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MANHWTVDTARHTYAVPHWGDGYVDVDEAGCIVMRPRGAYGPALSLPAIVARACAEGLRL
PLLVRFPDILADRLARLQTAFAKAIDEWHYAGGYTAIYPIKVNQQRGVAGELVAAGVHGF
GLEAGSKPELMAVLAMARPGSIVICNGYKDREYIRLALIGRKLGLRVHIVIEKLSELDHV
FAEARALGVEPLLGVRVRLASIGAGKWQNTGGDKGKFGLSPAQVLSLIERLEQAGLKHTL
KLQHFHMGSQISNVRDIANGMREATRYFVELSRMGVPLEIVDVGGGLGVDYEGSRSRSHN
SINYSIEQYAATIVQSLAEAVEAEGLVAPHILTEAGRAMTAHHAVMVVNVTEVEEVPAGA
IPPPCADEPAVLRRLRETWEELDRRPALELFHEAQHHLSEGQALYALGQLALADRARLDE
MYYAITNAVRERLLPAERSHRQALDELDEKLVDKYFVNFSVFESIPDVWAIGQIFPIAPI
ARLDERPTRRGVIVDLTCDSDGRIDHYVDAEGVDVSLPLHALRDGESYRLGIFMVGAYQE
TLGDIHNLFGDTDAVNVRVDGDGYTFAHVRRGDTTDLMLDYVGYDLETLRASYRERIAAA
GLAGDEAARLYDALDGGLTAYTYLAEAH
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccattggactgtcgacaccgcccgccacacctatgcggtgccgcactggggc
gacggctacgtggacgtggacgaagccggctgcatcgtgatgcgcccgcgcggcgcgtac
ggcccggcgctgtcgctgccggcgatcgtcgcgcgcgcctgcgccgaaggcctgcggctg
ccgctgctggtgcgctttccggacatcctggccgaccgcctggcgcggctgcagacggct
ttcgccaaggccatcgacgagtggcactacgccggcggctacaccgcgatctacccgatc
aaggtcaaccagcagcgcggcgtggctggcgagctggtggccgccggcgtgcatggcttc
ggcctggaggccggttccaagcccgaactgatggcggtgctggcgatggcacggcccggt
tccatcgtgatctgcaacggttacaaggatcgcgagtacatccgcctggcgctgatcggc
aggaagctcggcctgcgcgtgcacatcgtgatcgagaagctgtccgagctggaccacgtg
ttcgccgaggccagggcgctgggcgtggagccgctgctcggcgtgcgcgtgcgcctcgct
tccatcggcgccggcaagtggcagaacaccggcggcgacaagggcaaattcgggctgtcg
ccggcgcaggtgctcagcctgatcgagcggctggagcaggccgggctcaagcacacgctg
aagctgcagcacttccacatgggctcgcagatttccaacgtgcgcgacattgccaacggc
atgcgcgaggccacccgctatttcgtcgagctcagccgcatgggcgtgccgctggagatc
gtcgacgtcggcggcggcctcggcgtggactacgaaggttcgcgctcgcgcagccacaac
tcgatcaactactcgatcgagcagtacgccgccaccatcgtgcagtcgctggccgaggcg
gtcgaggcagaagggctggtggcgccgcacatcctcaccgaggccggtcgcgcgatgacc
gcgcatcacgcggtgatggtggtcaacgtgaccgaggtggaggaagtgccggccggggcg
atcccgccgccgtgcgcggacgagccggcggtactgcgccggctgcgcgagacctgggaa
gaactggaccggcgccccgcgctggagctgttccacgaggcgcagcaccacttgagcgaa
ggccaggcgctgtatgcgctgggccagcttgcgctggccgaccgcgcgcggctggacgag
atgtactacgcgatcaccaacgccgtgcgcgaacgcctgctgccggccgagcgctcgcac
cggcaggcgctggacgagctggacgagaagctggtcgacaagtacttcgtcaacttctcg
gtgttcgagtcgatccccgacgtgtgggcgatcgggcagatcttcccgatcgcgcccatc
gcgcggctggacgaacggccgacgcggcgcggcgtcatcgtcgaccttacctgcgattcg
gacggccgcatcgaccactacgtcgacgccgaaggcgtggacgtcagcctgccgctgcac
gcattgcgggacggcgaaagctaccgcctcggcatcttcatggtcggcgcctaccaggag
acgctgggcgacatccacaacctgttcggcgacaccgatgcggtgaacgtgcgcgtggac
ggcgacggttacactttcgcgcatgtacgccgcggcgacaccaccgacctgatgctcgat
tacgtcggctacgacctggagacgctgcgcgccagctaccgcgagcgcatcgccgccgcc
ggcctcgccggcgacgaggcggcgcgcctgtacgacgcgcttgacggcggactcaccgcc
tacacctatctggccgaggcgcactag
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