Rhincodon typus (whale shark): 109911030
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Entry
109911030 CDS
T06055
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-2
KO
K04804
nicotinic acetylcholine receptor alpha-2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109911030
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109911030
Ion channels [BR:
rtp04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
109911030
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
RE_Bsp6I
Motif
Other DBs
NCBI-GeneID:
109911030
NCBI-ProteinID:
XP_020365858
LinkDB
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Position
9:89910946..89929190
Genome browser
AA seq
513 aa
AA seq
DB search
MFTLLHSAGSVPGGCSLLLICSLFLCRCIYCQEKTHSQAEERLFKHLFTGYNRWSRPVPN
ASDAVIVNFGLSIAQLIDVDEKNQMMTTNVWLKQEWYDYKLTWDPAEFDNVTSIRVPSEM
IWIPDIVLYNNADGEFAVTHMTKAHLFSTGQVQWVPPAIYKSSCSIDVTFFPFDQQNCKM
KFGSWTHDKSKIDLRSMGRNVDLKDYWESGEWAIVNTVGIYNSKKYDCCFEVYVDITYSF
IIRRLPLFYTINLIIPCLLISCLTVLVFHLPSACGEKITLCISVLLSLTVFLLLITEIIP
STSLVIPLIGEYLLFTMIFVTLSIVITVFVLNIHHRSPNTHKMPRWVRKVFLDFIPCWLF
MKRPRSKTEMFTDHFSPLELKLGLSKCCPPLRGQEPWFDLAPCQPSLAGPCALGHPESSR
STVEMDDGNRRAWPSNTTQTGANLSLSPSIMRALEGVHYIANHLRAEDADVSVKEDWKYV
AMVIDQIFLWIFIIACLLGTFGLFLPPCLAGMI
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcttttacactcggcaggaagtgtcccaggaggctgcagtctgctcctaatc
tgttccctcttcctgtgcagatgcatctattgtcaggagaagactcattctcaggctgag
gagaggctcttcaaacatctcttcactggctacaatcggtggtccagacctgtccccaat
gcttcagatgctgttatcgtcaactttggtctttccatcgcacagctcattgatgtggat
gagaaaaaccagatgatgacaacgaacgtttggctcaagcaggaatggtatgattataaa
cttacatgggatcctgcagagtttgacaatgtaacttcaatccgtgtcccttctgaaatg
atctggattcctgacattgttctttacaacaatgcagatggagagtttgcagtgacacac
atgacgaaggctcacctcttctcaacgggccaggtacagtgggtgcccccagctatctac
aagagctcctgcagcattgacgtcaccttctttcctttcgaccagcagaattgcaaaatg
aagtttggctcctggacgcatgacaagtccaagattgatctgaggagcatgggcaggaat
gtcgaccttaaggattactgggaaagtggcgagtgggcaatagtcaatacagtggggatt
tataacagcaaaaaatatgactgttgcttcgaggtgtacgttgatatcacatactccttc
attatcaggaggctccctctcttctacaccattaacctcatcattccttgtttactcatc
tcttgtttaactgttttggtcttccatttaccatcagcctgtggagagaagattactctt
tgtatctcggtattgctgtccctgactgttttcttgctgcttattactgaaatcatcccc
tcgacttcgctggtcatccctttaattggagaatacctactcttcaccatgatcttcgtc
acgctctccattgttatcacagtctttgtcctcaacatccaccaccgctcgcccaacacc
cacaagatgcccaggtgggtgaggaaggtcttccttgatttcatcccttgctggctcttc
atgaagagaccgagatccaaaaccgaaatgttcaccgaccacttcagtccattagagttg
aaacttggcctgtccaaatgctgccctcccttaaggggtcaggagccatggtttgacctg
gccccctgccagcccagtctggcgggaccttgtgccctcggtcaccctgagtcaagcagg
tccacagtggagatggacgatggaaaccgccgagcctggccaagtaacaccactcagaca
ggagccaatctgtcgctgtctcccagcattatgagagcactggagggagtgcattatatt
gccaaccatctccgagctgaggatgccgatgtttcagtgaaggaagattggaaatatgtt
gccatggtgattgaccagatttttctctggatatttatcatcgcctgtttgttgggaacg
ttcggacttttcctcccaccctgcctggctggaatgatttga
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