Rhincodon typus (whale shark): 109911474
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Entry
109911474 CDS
T06055
Symbol
tra2b
Name
(RefSeq) transformer-2 protein homolog beta isoform X5
KO
K12897
transformer-2 protein
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109911474 (tra2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rtp01009
]
109911474 (tra2b)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rtp03041
]
109911474 (tra2b)
Protein phosphatases and associated proteins [BR:
rtp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
109911474 (tra2b)
Spliceosome [BR:
rtp03041
]
Common components
Common spliceosomal components
SR proteins
109911474 (tra2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
Motif
Other DBs
NCBI-GeneID:
109911474
NCBI-ProteinID:
XP_020366382
LinkDB
All DBs
Position
7:4205947..4245185
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AA seq
274 aa
AA seq
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MSDTEEQTYVERDSRSPSKSPSGSPHGSGKSASQSPENSPDRSRSRDGSRRSRSKSRSRS
RSKSRSVSRRSSRRRYSRSRSRSRSRRRRSRSRSYSPDYRRRRSHSRSPMSNRRRHIGNR
ANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQQSNRSRGFSFVYFENVDD
AKEAKERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTYSSRRRDSYDRYDRYDDRE
YYSRSYRRRSPSPYYSRGGYRSRSRSRSYSPRRY
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccgaagaacaaacctacgtcgaaagggattcacgttctccttctaaatca
ccaagtgggagtccacatggatctggcaagtctgccagccagtctccagaaaattctcct
gatcgttcccgttccagggacggatcaagacgctccaggtccaagtctcgatctcgttcg
agatccaaatccaggtctgtatcccggaggagttctcgcaggcgttattcaaggtctcga
tcacgctctcgttcgcgccgtagaagatccagaagcaggtcttacagccctgattatagg
cgccgccgtagtcatagccgatctccgatgtcaaatcggaggcgtcatattggcaatcgg
gctaaccctgaccccaacacttgtctgggagtttttggattaagtctgtataccactgag
cgagatctgcgagaggtcttttcgaggtatggtccacttgcaggggttaatgtcgtgtat
gatcaacagtcaaatcgctccagaggcttttcttttgtctactttgagaatgtcgacgat
gctaaagaggctaaagagcgggccaatggaatggaattggatggacgcaggattcgtgtt
gatttctcaattactaaaagagctcacacacctacccctggaatctacatgggaagacca
acttatagttcacgccgcagagacagttatgaccgatatgacagatatgatgatcgagaa
tattacagtaggtcctacagaaggcgttctccatctccatattatagcaggggtggctat
cgttctcgctcaaggtcacgttcgtactctccacgtcgctactga
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