Rhincodon typus (whale shark): 109912847
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Entry
109912847 CDS
T06055
Symbol
spo11
Name
(RefSeq) meiotic recombination protein SPO11 isoform X1
KO
K10878
meiotic recombination protein SPO11
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rtp03036
]
109912847 (spo11)
Chromosome and associated proteins [BR:
rtp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
109912847 (spo11)
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GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Motif
Other DBs
NCBI-GeneID:
109912847
NCBI-ProteinID:
XP_048464444
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Position
19:55135521..55186017
Genome browser
AA seq
397 aa
AA seq
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MEPSVRIADFAAMERHRAILQQSLRVEAELGDPSHQLVRAEPLGSSDVLKKIENVIKETL
TYLAKGEAPVIAFDKRSSWENIWFDGNVGLQMLSDSAMSKVKCECSRSIHRFALILKTLA
MIYKLVQSNTYATKRDLYYNDTQLFGSQTILDGIINDISCMLKVPRRSLHILSTLKGCIA
GDLCYTEEDGNRVNCACNSTAVLVPSNVDGIQNLKSAAKFVLVVEKDATFQRLLDDDFCT
KLFPCIIITGKGVPDLSTRLMVRKLWDILHIPAFALMDADPHGIEIMCIYKYGSRSMSFD
AHSLTVPIISWLGLLPSDIQRLNIPKEALIPLTNNDVRKLSMLQKRPYVNWQPLWKKEME
IMEKCKVKAEIQALESISSDYLTRVYLPNKLKFGGWI
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagccgtccgtgcgaatcgctgacttcgcggcgatggagaggcaccgggccattctg
cagcagtccttgcgagtggaggccgagctcggtgatccgagccatcagctggtgcgggca
gagccactgggcagctctgatgttcttaaaaagattgaaaatgttatcaaagaaacactc
acatatcttgcgaagggagaagccccagttattgcttttgataaacgatcatcctgggaa
aatatttggtttgatggcaatgttggtttgcaaatgctatctgattctgctatgagcaaa
gtaaaatgcgaatgctccagatcaatccacaggtttgctctaatacttaagaccctggcg
atgatctacaagttggtgcagagcaatacttatgcaaccaaaagagacctgtactacaat
gacacacagttgtttggatcacaaacaattcttgatggtattatcaatgatataagctgc
atgttaaaagtcccacgcaggtctcttcacatactctctactttgaaaggctgcattgca
ggcgatctatgctatacagaggaagatggcaacagagtgaattgtgcctgcaattcaact
gctgttcttgtgccatccaatgtggatgggatacaaaatttaaaatctgctgctaaattt
gtgcttgtagtggaaaaagatgccaccttccagaggttattggacgatgacttttgcaca
aaactgttcccatgtattattataactggaaaaggagtaccagatctaagcaccagactg
atggtccggaaactatgggacattctacacattccagcttttgcccttatggatgctgat
ccacatggcattgaaatcatgtgtatctacaagtatggttcgaggtctatgtccttcgat
gctcatagtctgactgttcccattatcagttggttgggtctacttccatctgatattcaa
agattaaatataccgaaagaagctttaattcctcttactaacaatgacgtgagaaagttg
agcatgctgcaaaagagaccctatgttaactggcaacccctctggaagaaagagatggaa
attatggagaagtgtaaagtgaaggctgaaatacaggccctggaatctatttcttctgac
tacctcacaagagtatacttgccaaacaaactcaagtttggtggatggatataa
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