Rhincodon typus (whale shark): 109914402
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Entry
109914402 CDS
T06055
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109914402 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109914402 (trim32)
Enzymes [BR:
rtp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109914402 (trim32)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
109914402 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-C3HC4_4
zf-B_box
OmpH
Baculo_IE-1
zf-RING_4
Vgb_lyase
Sina_RING
FYVE
Haem_bd
Muted
NAR2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
109914402
NCBI-ProteinID:
XP_020369582
LinkDB
All DBs
Position
28:complement(12955189..12959652)
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AA seq
644 aa
AA seq
DB search
MATSLDADIVREVLECPICMETFNQTVIRPKLLQCGHTICKQCLEKLIANSINGVRCPFC
SKITRMNNLSQLSDNLTVLKIIDSASLSEAMCTVMCKVCRKRLPRNFCENCCLVLCEACK
TDCHQAQGHTVVTIRAEAEQRRKEIGIKLAKLREMMVDMQRKKTAMDTVAKNMQSKYKAV
HQDYSRAEQRIQEELAKSRRAFTSAVSEVEKVNNQILEEHAYLINIAEVQIVSRSDYLST
KIKQADTALLEEAIDDEDPDLTNNMPTHLTLQQVDLVKGDHLGPTEIGQIETRPYTVPSE
ETLMETFTPTASTQETDSPKDMASVLQASSPKSREPESMASGPPNCQLMKKIGSHGNLPG
MFHLPVSLCVTVQGEVLVADRGNFRVQLFNQKGFMKEIRRSPNSIDNFVLSFLGAELPNL
IPLSVAVNSIGLIGVTDNYDNSVKIYTTAGQCVACHRNQLTKPWGIAAMPSGQFVVTDVE
GGKLWCLTVDRNVGVINYSRLCSAVRPKFVTCDANGSVYFTQGLGLNLENSQNEHHLEGG
FSIGSVSPEGQLSRQYSHFFAENEDFRCIAGMCVDINGNLLVADSGRKEILLFPKEGGFV
SLIREGLVCPVGVAVSPKGQLLVLDCWDHCIKIYNYHSRQHVTN
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcaactagcctggatgcagacattgttcgtgaagtactggaatgtcccatctgtatg
gagaccttcaaccaaactgtaataaggcccaaactcctacagtgtgggcatacaatttgt
aagcaatgtttggaaaagctcatagcaaacagtataaatggagtgcgttgtcccttttgc
agcaaaataaccaggatgaataatctgtcgcaactttcagacaatcttacagttttaaaa
atcattgattcagcctctctgagtgaagcaatgtgtacggtcatgtgcaaagtctgccgg
aagaggctgcctcgaaacttctgtgagaactgctgcctggtcctttgtgaggcctgcaag
actgactgtcatcaagcgcaagggcacaccgttgtcacaattcgcgctgaggctgaacag
cggcggaaggagattgggattaagcttgccaagctacgggagatgatggtggacatgcag
cgcaagaagactgccatggacacggttgcaaaaaacatgcagtcaaaatacaaagcagtc
catcaggattacagtcgggctgaacagaggatacaggaggaactggccaaatctcgcagg
gctttcacatcagcagtgtcagaagttgaaaaggtgaacaatcagatactggaggaacat
gcttatttgatcaatattgctgaggtgcagattgtgtcacgctctgattacctcagcacc
aaaatcaagcaggcagacacagctcttcttgaagaagccattgatgatgaggaccctgat
ttgactaacaacatgcctactcatttaacactgcagcaggtagatttggttaaaggagac
cacctagggccaacagaaattggacaaattgagacaaggccttatactgttcccagtgaa
gagacactcatggagacatttacccccactgcctcaacacaagagacagactccccaaaa
gatatggccagtgtcctgcaagcatcatctccaaaaagcagggagcctgaaagcatggcc
tccggaccccctaactgtcagctgatgaagaaaattggctcccatggaaacttaccaggg
atgttccaccttccggtgagcctgtgcgtgacagtacaaggggaagtgctcgtggcagat
cggggaaactttcgagttcaactgttcaatcagaagggctttatgaaggagattagaaga
agcccaaatagtattgacaattttgttctcagtttccttggtgctgagctcccgaacctg
ataccactgtctgtggctgtcaatagtattggcttaattggggtgactgacaactatgat
aattctgttaagatttacacgactgcagggcagtgtgtagcgtgtcacaggaaccagctg
acaaaaccatggggtatcgctgcaatgccttctggacagtttgtggtgacagatgtagaa
ggtggaaagctttggtgtctaactgtggaccgtaacgttggtgttataaactattctcgg
ctgtgcagcgcagtcaggcccaagtttgtgacctgtgatgcgaatggcagtgtatacttc
actcagggcctgggcctgaacctggagaatagtcaaaatgaacatcacctggaaggtggc
ttctctattggctccgttagtcctgagggccagcttagtcgtcagtacagccacttcttt
gctgagaatgaagacttccgttgcattgcagggatgtgtgttgacatcaacgggaacctg
cttgttgcagacagtgggcgcaaggagattctcctctttcccaaagagggtggattcgtc
agtctgataagagaaggtttagtgtgcccagtcggggtggctgtctcacccaagggtcag
cttctagtattggactgctgggatcactgcattaaaatctacaactatcattcaaggcag
catgtaacaaattga
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