Rhincodon typus (whale shark): 109915228
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Entry
109915228 CDS
T06055
Name
(RefSeq) ATP-dependent translocase ABCB1-like
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109915228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109915228
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
109915228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_30
Rad17
RsgA_GTPase
AAA_28
AAA_5
DUF2207_C
AAA_14
Zeta_toxin
AAA_7
SRP54
DEAD
CPP1-like
DUF1158
Motif
Other DBs
NCBI-GeneID:
109915228
NCBI-ProteinID:
XP_048467706
LinkDB
All DBs
Position
2:complement(81458068..81550025)
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AA seq
1317 aa
AA seq
DB search
MVQEFKANHVQDVAACGSSTVGYDNQGYQEDGNADAGHPQKGKGKSENKEKEVTKAVGIF
ELFRFADRLDILLILLGLICAIVHGVALPLVIIVFGEMTDSFVSSGIMPNISTAAFNNSS
TDACFKIPGLDLEGDMTLFALYFMGLGFAALILGSLHVTMFLLAGIRQTGRIRQKFFHAI
LHQEMAWFDSVQIGELNTRLLEDINSVKEGLGDKISIFTQLSSTSVTGFIIGFVYGWKLT
LVILAVCPLIMVIVAAWTKMLTTLNSKELTAYAKAGAVAEEILMGIRTVFALNGQQKALA
KYEANLKHTKDIGIKKAVITNIFIGLQRFFSYGAYALAFWYGSKLVVDEPENYSIGRVLI
VFFSVVAGAFSLGQGLSNVESISKARSAAYNVYSLIAKHRPIDSSSKVGHKPDNIKGDIE
FKNVHFAYATRPDTVILKGLNMKVLSGQTVALVGASGCGKTTTIQLLQRFYDPEEGEITV
NGHDIRTLNVKWLRQHIGIVSQEPILFSTTIAENIRYGREDVTDAEIEQAAKEANALDFI
SMLPDRFNTMVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTQSESIVQAAL
DKARTGRTTIVIAHRLTTIRTADVIAAFDNGVVTEQGKHSELMQRKGLYYSLVKQQNSCR
DSESDEETDDTLKEVKPSENEQKSVKIINRNSIKSRNSIKSRKSSRKHHQFASSEQEHTT
KANEQEKEPEESLQEISYSQILALNKPEWLYIAIGLLTTVISGAVIPAFAVVFSRIIGVF
AILDPDLKQQKTAMFSLIFLALGAIFFLSYSIQGYMFAKSGEILTMRLRGLSFKSILQQD
ISWFDDHKNAVGVLITHLATDASQVKGATGIRLGMMAMNVCTLGADIILAFIFGWQLTLL
ILCLIPFLLAANIIAMKSVLGHASKDNKSLEESGKISTEAIENIRTVVSLTREDAFYKKY
MEHVDKPNRTSLSKAPLYGFSYGLAQCVVFFVQSAVFRFGAWLIVNCFMTFENVFLVFAV
IVFTAAHLGQSSTLTPDYTKAKISAQKIFQLLERKSLIESYIEEGEKLSNFEGNIEFCDV
KFSYPTRPDIQVLKGLSVQVHKGQSLALVGSSGCGKSTSVQLLQRFYDAVDGQLLVDGKD
CKCLALSWLRQQIGIVSQEPILFDCSIAENIEYGDNSKTVTQEEIEEAAKAANIHNFIQS
LPEGYNTRVGDKGTQLSGGQKQRIAIARALVRKPKILLLDEATSALDNESEKIVQQALDK
ARQGRTCIIIAHRLSTIQNADIIAVIQNGQVVEKGNHNQLLSKEGAYHALVHAQVQH
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atggttcaagagttcaaagcaaaccacgtgcaagatgttgctgcctgtggatcctcaact
gttggctatgacaatcaaggctaccaggaggatgggaatgcagacgctggtcatccacag
aaaggaaaaggaaagagtgagaataaagaaaaggaggtaacaaaggcggtcggaattttt
gaactgtttcgctttgcagatcgattggacatcctgttgatattactaggactgatctgt
gcaatagtacatggagttgctttgcctctcgtgatcattgtttttggagaaatgacggac
agttttgtcagcagtggtatcatgcctaacatctctactgcagcatttaacaacagctca
acagatgcatgttttaaaatacctggactggatttggaaggtgacatgacactgtttgcc
ctctactttatgggtcttgggttcgctgccctgattttaggcagtttacatgtcaccatg
tttttattggctggcatacgacagactggaagaataaggcaaaaatttttccatgcaatt
cttcatcaagaaatggcttggtttgactcagtccaaataggtgaactaaacacaaggctg
ctggaagatataaattctgtcaaagagggtctcggagacaagatcagcatattcacacag
ttatctagcacttctgtgacaggatttatcattggatttgtctatggatggaagcttaca
ctagtcatattggcagtgtgtccccttatcatggtcatagtagcagcatggacaaagatg
ttgacaacactgaacagtaaggaactgacagcttatgctaaagcaggggcagtggctgaa
gaaattctaatgggaataagaacagtctttgcacttaatggccaacaaaaagcactagca
aaatatgaagccaacttaaagcatactaaagatattggaataaagaaagccgtcatcaca
aatatttttataggacttcagcgctttttcagttatggtgcctatgctcttgcattttgg
tatgggtccaaactagttgtcgatgaacctgaaaattattcaattggacgagttttgatt
gtgtttttttccgtggtcgcaggagcgttctcacttggccagggactatcgaacgtagaa
agtatttcaaaggctcgaagtgctgcttacaacgtgtatagtcttattgcaaagcatcgg
cccatagacagcagctccaaagttggtcataagccagataatatcaaaggagatattgaa
ttcaagaatgttcacttcgcctacgcaactagaccagatacagtgattcttaagggcttg
aacatgaaagttttgagtggacagactgttgcattggttggagccagtggttgtggtaaa
actacaacaattcaactgctccagagattttatgatccagaagaaggagagatcactgtt
aatgggcatgatatccgtactttgaacgtgaagtggctgagacaacacattggcattgtt
agccaggaaccaatactattttccacaacaattgctgaaaacatacggtatggtcgagag
gatgtaactgatgcagagattgagcaagctgcaaaggaagcaaatgctttagactttata
tcaatgcttcctgatagatttaatacaatggttggtgaaagaggtgcccagctgagtggt
ggacagaaacagagaattgctattgctcgtgcgttggtcagaaacccaaagatccttctg
ctggatgaagcaacatctgctcttgatactcagagtgaatctatagtgcaggcagcattg
gataaggcaagaacaggtcggaccaccattgtgattgcccaccgcctcacaacaattcgc
actgccgatgttattgctgcctttgacaatggagtggtcactgaacaaggaaaacacagt
gaactcatgcaaagaaagggtctctattattccctggtaaagcaacagaattcttgtagg
gacagtgaaagtgatgaagaaacagatgatactttgaaggaagtgaaaccatcagaaaat
gaacagaaaagtgtaaagattattaacaggaacagcattaaaagcaggaacagcattaaa
agcaggaaatcaagcaggaaacatcaccaatttgcttcctctgaacaagagcatacaaca
aaggccaatgaacaagaaaaagaaccggaggaaagtttgcaagaaatttcatattcacaa
attcttgctttgaacaagccagagtggctgtacattgccataggcctactcactaccgtg
atatccggagctgtcataccagcgtttgctgttgtgttttccaggattattggggttttt
gcaatcttggaccctgacttgaaacaacagaagactgccatgttttcattgatattcctg
gctctaggtgctattttctttctgagctacagtatacagggatatatgtttgcaaagtct
ggagaaatcctaactatgaggctgcgtggattatcttttaaatccatcttgcaacaggat
atcagttggtttgatgatcacaagaatgctgttggtgtgctaataacccatctggctaca
gatgcatcacaggttaaaggggccactggaatacgacttggtatgatggcaatgaatgtt
tgcaccctcggggcagatataatccttgcattcatttttggctggcagttaactctcctc
atcctgtgccttatcccatttcttcttgctgcaaatattattgcaatgaaatcagttctg
ggacatgcatctaaggacaacaaatctcttgaagaatctggaaagatttcaacagaagct
atagagaacattagaaccgtggtatctttaacaagagaagatgctttctataaaaaatac
atggaacatgtagataaacctaacagaacctccctctcaaaagctccactctatggcttc
agctacggattggcacaatgtgttgtattttttgtgcagtctgcagtcttccgatttgga
gcatggctcatcgtaaattgtttcatgacttttgagaatgtgttcttggtttttgctgtc
attgtatttactgctgcgcacttgggacaatcttcaactcttacaccagactatacaaaa
gctaaaatttctgcacaaaagatattccaacttttagaaaggaagtcactaattgaatct
tacatcgaagaaggagaaaaactgagcaattttgaagggaacattgagttctgtgatgtg
aaattttcataccctacacggccagacatacaggtcctgaagggtctgagtgtacaagtt
cataaaggccaatctctggctcttgttggaagcagtggatgtggaaagagcacatcagtt
cagttacttcagagattttatgatgctgttgatggacaattgttggtagatgggaaagat
tgtaaatgtctcgccttgtcttggttgagacaacagattggaatcgtatcacaggagccc
atactctttgactgtagcattgctgaaaatatagaatatggtgacaacagcaaaactgta
actcaagaagagattgaagaggctgcaaaagcagctaatattcacaatttcatacaaagc
ttgcctgaagggtacaacactcgagtaggagataaaggaacacaactttctggtggtcaa
aaacaaagaatagccattgctcgagcccttgtacgtaaaccaaagatcctactccttgat
gaagcaacatctgccctggacaatgaaagtgaaaagattgtccagcaggccttggataaa
gccaggcagggtcgaacctgcatcatcattgcccaccggttgtcaacaatccaaaatgct
gacattatagctgtgatacagaacggtcaagttgtggaaaagggaaatcataaccagctc
ctcagtaaagagggagcctatcatgcacttgtccatgcacaagttcagcattaa
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integrated database retrieval system
