Rhincodon typus (whale shark): 109916086
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Entry
109916086 CDS
T06055
Symbol
acsl1a
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1a
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp00061
Fatty acid biosynthesis
rtp00071
Fatty acid degradation
rtp01100
Metabolic pathways
rtp01212
Fatty acid metabolism
rtp03320
PPAR signaling pathway
rtp04146
Peroxisome
rtp04216
Ferroptosis
rtp04920
Adipocytokine signaling pathway
Module
rtp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
109916086 (acsl1a)
00071 Fatty acid degradation
109916086 (acsl1a)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
109916086 (acsl1a)
09143 Cell growth and death
04216 Ferroptosis
109916086 (acsl1a)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
109916086 (acsl1a)
03320 PPAR signaling pathway
109916086 (acsl1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rtp01004
]
109916086 (acsl1a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rtp04147
]
109916086 (acsl1a)
Enzymes [BR:
rtp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
109916086 (acsl1a)
Lipid biosynthesis proteins [BR:
rtp01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
109916086 (acsl1a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of breast milk
109916086 (acsl1a)
Exosomal proteins of breast cancer cells
109916086 (acsl1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
109916086
NCBI-ProteinID:
XP_048476418
LinkDB
All DBs
Position
3:105620839..105739965
Genome browser
AA seq
698 aa
AA seq
DB search
MQASDLVTHLRIPELWEVRQFVRSLPPSALIGIGTIAALMAYWYATRPKPQKPPCDLTMQ
SVEVESAELARKSVLLKQRDMITSYYVDVKTLYDVMKRGLIVSSNGPCLGSRSPNQPYQW
ISYQEVISRAEHVGSGLFTRGYRPGNNQFIGIFAQNRPEWVIIEQACYTYSMVVVPLYDT
LGDEAISYILNKADIAVVFCDTPARAEAVLYSVESKQTPDIKIIIIMDPFGTELKQRGIQ
SGVEVVSLKTIEFAGRDQKWKPKPPRPGDLAVICFTSGTTGNPKGAMLTHRNIISNFSAF
VQVTEGQWVASPSDIHISYLPLAHMFERLVQIVVLCHGARIGFFQGDIRLLMDDIKVLRP
TIFPVVPRLLNRMYDKIHSQASSFIKRWILQFATWRKTAELRKGIMRRNSIWDTLVFRKI
QDSLGGRVRLMVTGAAPVSETVLTFIRAAVGCQFYEGYGQTECTAGCSMTIPGDWSAGHV
GAPMPCNLIKLVDVEEMNYFAREGEGEICVKGTNVFRGYLKDPEKTAEALDNHGWLHTGD
IGKWLPNGTLKIIDRKKHIFKLAQGEYIAPEKIENIYVRSEPVVQVFVHGDSLQAFLVGI
VVPDPEVLPAWAQRRNITGTFEELCKNKVLKDAILADLTRIGKEAGLKSFEQVKDIVLYP
EMFTVQNGLLTPTFKAKRAQLKIFFSSQIAELYKNITV
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaagtgatctggtgacacacctgcgcatcccagaactttgggaggtccggcag
ttcgttcgctctcttccaccatccgctctaataggcattggcaccattgcagcacttatg
gcatattggtatgccacaagacccaagccacagaaacccccatgtgacctgactatgcag
tccgttgaagtggagagtgctgaacttgctcggaaaagtgtactacttaaacagagagat
atgataacttcgtactatgtggatgtaaaaacgttgtatgatgtgatgaaaaggggtttg
attgtatcaagtaatggtccttgtttggggtccaggagtccaaatcagccttaccaatgg
atatcctaccaagaagttatatccagagcagaacatgtgggttcagggttattcacacga
gggtacagaccagggaataatcaatttataggaatatttgcacaaaacagaccagaatgg
gttattattgaacaggcctgttatacctactccatggtggtggtgccattatatgataca
ttgggagatgaagccatttcctacatcttaaacaaagcggatattgcagttgtattctgt
gacacaccagccagagcagaagctgtattatacagtgtggaaagtaagcaaacaccagac
attaagatcatcattatcatggatccttttggaactgagctgaagcaaagaggaattcag
agtggagttgaagttgtatccttgaagacaatagagtttgctggaagagaccagaaatgg
aaaccaaaaccaccacgacctggtgacttggctgttatttgtttcacaagtggaaccaca
ggaaatcctaaaggagcaatgctgacgcatagaaacatcatatctaatttctctgcattt
gtgcaagtcacagagggacaatgggtggcatcaccctctgacatacatatttcctattta
ccacttgcacacatgtttgaacgtttggtgcagattgtggttctatgccatggtgcacga
attggcttctttcagggagacatcagactgctaatggatgacatcaaagttttgcggcca
actatttttcctgttgttccccgtctgctgaataggatgtatgataagatccacagccag
gccagcagctttataaaaaggtggatattgcaatttgcaacttggagaaaaacagcagag
cttcgaaaaggcataatgcgacgcaacagcatatgggatacattggtcttccgtaaaata
caggacagtcttggaggccgggtaagattaatggtaactggtgcggctcccgtgtctgag
accgtgcttaccttcatcagggctgctgtaggttgccagttttatgagggatacggacaa
actgagtgcacagcaggctgttcaatgaccattcctggagattggtcagcaggacatgtt
ggagctccaatgccttgtaatctgattaaacttgttgatgtagaagaaatgaactatttt
gcaagagaaggggagggtgagatttgtgtaaaagggacaaatgttttccgtggttactta
aaagaccccgagaaaacagcagaagctctggataaccatggctggttgcacacaggggat
ataggaaagtggctgccaaatggcactctgaagataatcgaccgaaagaaacacatcttc
aaactggcacagggcgagtacattgcaccagagaaaattgagaacatctacgtgcgaagt
gagcctgtggttcaggtgtttgtccatggtgacagtctgcaggcctttctggtgggaatt
gtagttcctgatcctgaagtgttacctgcatgggcacaaaggagaaatattacagggaca
tttgaggaattgtgtaaaaacaaggttttaaaagatgctattttagcagatttaacacga
attggaaaggaagctggactcaagtcatttgagcaagtgaaagatatcgttctgtatcct
gagatgtttactgttcaaaatggccttctgactccaacgttcaaggcaaagagggcacag
ctgaaaattttctttagttcacaaattgctgaactttacaaaaacatcactgtataa
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