Rhincodon typus (whale shark): 109916144
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Entry
109916144 CDS
T06055
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
109916144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rtp04131
]
109916144
Membrane trafficking [BR:
rtp04131
]
Endosome - Golgi transport
Others
GGA
109916144
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GGA_N-GAT
GAT
TRI5
DUF2096_N
Trypan_glycop
DUF790
Motif
Other DBs
NCBI-GeneID:
109916144
NCBI-ProteinID:
XP_048465433
LinkDB
All DBs
Position
21:27060902..27090467
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AA seq
650 aa
AA seq
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MAAEEGETLESWLNKATNPLNSEEKWEYIKGFCDQVNLELEGPQIATRLLGHKIQSPQER
EALYALTVLETCMNNCGKRFQNEAGKYRFLNDLIKVLSPKYLGTWSSEKVKAKIIEMLYS
WTLWLPSEIKIRDAYQMLKKQGVIKKDPKLPNVKPFPPPSPRMESSLFDDEEKSKLLARL
LKSNNPEDLQAANRLIKNVIKEDQEKTEKITKRIHAIEEVQNNTKLLNEMLSLYQGDRLP
KDQMEILKGLYQRCEKLRPTLFRLASDTIDNDEALVEILQANDSLTLVVNLYKKIVEGRE
EDKIPSKESASTADTMLADLTDLESDFTSSATISNLDSKKQLPSWLDEELMSLGLNDPPL
IQQVQGSMNRNTSEEVTTSETVPNPTTNGSRGLAGLDLLGKTVMEQSLGSRVSTIRWDQP
QVKPTLNELQNQSLTQQLAAAKDSSSPATSAQFTTTGLLPQWTMPSSGTAELCQDSPSQP
LCTVSGSPTPQIPSPARPQEAGSDELSLKNVFVPLENIKTSSVPPITVFDRDGFRVLFHF
AKALPVGRPDLLVVVITLLNSAPTPIKNITFQAAVPKVMKVKLQPASGTELPAFNPILSP
PVISQVMLLANPQKERVRLRYKLLYTLAEQLFTKVGEVTEFPAVEIWGNL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggagggagagactctggagtcttggctgaataaagcgacaaacccacta
aactcagaagagaaatgggaatacatcaaaggattctgcgatcaggtcaatctggaactg
gaaggcccacagattgcaactcgccttttgggtcacaaaatccaatcaccacaagaaagg
gaggcactatatgcgctaacggtattggagacctgtatgaataactgcggcaaacgcttt
cagaatgaagctggaaaatatcgatttttaaatgatctaattaaagtcttatcaccaaag
tacttgggcacgtggtcctctgaaaaagtgaaggccaagataatagaaatgttgtacagt
tggacattgtggctgccaagcgaaataaaaatcagagatgcctaccagatgctgaagaag
caaggtgtcataaagaaggatcctaaattaccaaatgtgaaaccttttccaccaccttct
ccgagaatggagagctcactttttgatgacgaagagaaatcgaagctccttgcaagactt
ctcaaaagtaacaatccagaggatttgcaggctgccaacagactcatcaagaatgtcatc
aaagaggaccaagagaagactgagaaaatcaccaaaaggatacatgccattgaggaagtg
caaaacaatacaaagctgctgaacgagatgctgagcctgtaccagggagatcgtttaccc
aaagaccagatggaaatactaaagggcttgtatcagcgctgtgagaaactgcggccgaca
ctatttcgacttgcaagtgacaccatagataacgatgaagctctggtggaaattctacaa
gccaatgattcactcacccttgtggtcaacttgtataagaagatagtggagggacgtgaa
gaggacaaaataccctcaaaagaatcagcttccacagctgataccatgctggcagattta
actgatttggaatctgactttacgagttctgctaccatctcaaatctggactccaagaag
caactgccctcctggcttgatgaagagctaatgtctttgggcttgaatgatcctccactg
attcagcaagtgcagggatccatgaataggaacacatctgaggaagtgactacatctgaa
actgtaccaaaccccacaaccaatggcagcagaggcctggctggcctggacctgctgggg
aagacagtgatggaacaaagtcttgggtcccgagtgtcaactattcgatgggaccagcca
caagtgaaacccacattgaatgagcttcagaaccagtccctgacccagcagctggctgca
gccaaggattccagctcacctgcaacttcagctcaattcacaacaacaggtcttctccct
caatggacaatgccatcttctggaacagcagaactctgccaggactccccctcccaacca
ctctgcactgtgtccggctcacccactccacagatcccatcacctgccagaccccaggaa
gctggctcagatgaactgtccttgaagaatgtctttgtgcctttggagaacattaaaaca
agtagtgttccacccatcacagtctttgacagagatggtttccgagtcctattccacttt
gccaaagcccttcctgtggggaggcctgatcttttggttgttgtcatcacattgctgaac
tccgcgccaacgcccataaagaatattacattccaagctgcagtgccgaaggtgatgaag
gtgaagctgcaacctgcctctggcacagagctccctgcattcaatcctatcctctcacct
cctgtcatctctcaagttatgctccttgctaacccccagaaggaacgggttcgcttgcgt
tacaaactactctatactttggctgaacagctcttcacaaaagtcggggaggtcacagag
ttcccagccgtggaaatctggggcaatctttga
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