Rhincodon typus (whale shark): 109916675
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Entry
109916675 CDS
T06055
Symbol
fbxo18
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109916675 (fbxo18)
Enzymes [BR:
rtp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
109916675 (fbxo18)
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
109916675 (fbxo18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box
F-box-like
UvrD_C_2
UvrD_C
AAA_30
AAA_11
Motif
Other DBs
NCBI-GeneID:
109916675
NCBI-ProteinID:
XP_048465954
LinkDB
All DBs
Position
22:40002785..40067427
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AA seq
951 aa
AA seq
DB search
MFNQNHRSSNVTMTLPGRGKRKHLNPSDCWFLSNSREGAFSLTRLFIYAGTSRDLNRGLH
PTDRKRRRSATRLCPHQRWWIHDADSLSEDAASGEAIIGPSSSKIDSVFDPEDFNLPVER
NMLILDSKDNGEGCVLLSGSPSETSDVVCAKRPSLEDAPVSQEWNWAEGDELEVDPLPDS
YFGLLGCTCSHALPAGHISQLPDEILRIVFFYLPAVDLYRLRSVSQQWHHVISDPVFVPY
RKLYYRYRKGEASAVKEIDWILKENHIKKEDELCMLNLIKHVVMFHLGMFVNAEAVLTCL
TDHPLFKQSEACVAQTLPHLVTGAKTGYVQALLAVIILLSNSVNDIQELISRLQQPCSTL
PVMEVTEILYYMATLLFALREKDINISNRIHYNLFYALYLMENPANISRKSVKRLLSTQD
SGRASVLDFSTRYQNKRKLIVYDLKPFSIFKFPEARGSFFRAKLICQSLCIFFSSSDETL
TVSHLPGHYKSMRGGIRPMEHQENQQLIEDTKQIWEKMVNLGETKENGYFMTRDGYLKLW
QLSKPRLLQFDVILLDEAEDCSPVIMDIVLSQKCGKILVGDPHQQTSEFGGSVNDLLKAH
RSHQFQLTQSFRFGPKIAYVAATILDVYKHVKDKTLVGGKQDGNIDNDTGQMAVLCRTSA
AVFDEAVCITTSEKPSKMYIIGGLDKFGMNIILDIWMLMIREKEQATKDLVICDPFIRIF
ERKGGLRGLKDYAIEAEDKELGERIALVEKYSLRLPALIEKITSYSVDDLKFADVVLGTA
CKAKGYEFHTVQITNDLVKVPGYRHDHRMLSEFRMDVVPDIDWNLLYIAVTRAKRHLVMN
KSLECLLSFAGEYFLKPELTSSLLREGMLLRCHAKGCSNFIESETALTLRKILNRQSDHS
WNTVNTFEPLGETYTGIGGIPEKARSVALAYGGSVKREKLSTLGMYLVEEE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaccaaaatcacaggagcagcaacgttacaatgactcttcctggacgaggcaaa
cggaaacatcttaatccatctgactgttggttcctgagcaatagtcgtgagggtgctttc
tctttgacccgactgttcatctacgcaggtaccagcagagatttgaacaggggcctccat
cccacggacagaaaaaggaggagatctgcaacacggctgtgtcctcaccaaagatggtgg
atacatgatgctgacagtctgtcagaagatgcagccagtggtgaagccatcattggccca
tcctcctccaagattgattctgtttttgatcctgaagattttaacttgcctgttgaaaga
aacatgctgatactggattccaaggacaatggggagggctgtgtcctgttgtctggaagc
ccaagtgagaccagtgatgtggtttgtgcgaagagacccagcttagaggatgcacccgtg
tcccaggaatggaattgggcagaaggtgatgaactggaggtggatcctctccctgactca
tactttgggttactgggatgcacctgctcccatgctctccccgctggccatatcagccag
ctgccagatgaaatcctcaggattgtgttcttttatctgccagctgtggacctgtatcgc
ctccgctcagtcagtcagcaatggcaccatgttatcagtgatccagtgtttgtgccatac
aggaagttgtactatcgatacaggaagggagaagcaagtgctgtgaaagagattgactgg
atcctgaaggaaaatcatattaaaaaggaagatgaactctgcatgttgaatctcataaaa
cacgtggtgatgttccaccttggtatgtttgtgaacgctgaagctgtcttgacttgcctc
acagaccatcctctgtttaaacaatctgaagcatgtgtggcccagacactacctcatttg
gtcactggagcaaagactggatatgtgcaggcgttgctggctgtgatcattctcctgtcc
aatagtgtgaatgacatccaagagctgatatcccgtctccaacaaccctgttcgacactg
cctgtaatggaggtgacagagatcctgtactacatggcgaccttgctgtttgccttgaga
gagaaggacattaatatcagcaacaggattcattacaatctgttctacgcactgtattta
atggagaatccagccaacatcagtagaaaatctgtgaagcgtcttctttcaactcaggac
tctggcagggcctctgtgcttgacttttccactaggtaccagaataagaggaagctaata
gtttatgatctgaagccgttttccatttttaaatttcctgaagcccgcggcagctttttt
agagcaaaattaatctgtcagagcctctgcatattcttctcctcttcggatgagactctc
accgtgtcacatttaccaggacactataagagcatgcgtggaggtatcaggccaatggaa
catcaagagaatcaacaactaattgaagacaccaagcagatttgggaaaagatggtgaat
ctgggtgaaactaaggagaatggttacttcatgactcgtgatggatatctgaagctttgg
cagctcagcaagccacggctgttacagtttgatgtcatccttttagatgaagctgaagat
tgtagcccagtaatcatggacattgtgctgtctcagaaatgtggcaagattcttgtgggt
gatccacaccagcagaccagtgaattcgggggttctgtgaatgatctacttaaagcccac
cgatcacatcagtttcaactgacacagagtttcagatttggacccaaaattgcttatgtt
gcagccacaatattggacgtgtacaaacatgtcaaagacaagaccttggttggtggaaaa
caagatggcaatattgacaatgacactgggcagatggctgttctgtgcagaaccagtgct
gcagtctttgatgaagctgtgtgcattactacgagtgaaaagccaagcaagatgtacatc
atcggaggacttgataaatttggaatgaacataattctggacatttggatgcttatgatt
cgggaaaaggaacaagcaaccaaggatctggtaatctgtgatccattcatcagaatattt
gaacgtaaaggtggtttgcgtggattgaaagattatgcaattgaagctgaagataaggag
ttgggagagaggattgcactggtggagaagtacagtctgaggctccccgcactgattgag
aaaatcaccagctactctgttgatgacctgaaatttgcagatgttgttttgggaactgca
tgcaaagcaaagggttatgagtttcacaccgtacagataaccaatgaccttgtgaaagtt
ccaggctatcgacatgatcatcgtatgctttcggagttcagaatggatgtggtgccagat
atcgattggaacttgctttacattgctgtgacacgggcaaaaaggcacctagtgatgaac
aaatctttagaatgtctgctttccttcgctggtgagtattttctgaagccagagctgact
tctagtttgctccgagaagggatgctccttcgttgccatgcaaaagggtgttcaaatttc
atcgagagtgaaactgcattaactctgagaaaaatattgaatagacagtcagaccacagc
tggaatactgtgaacacctttgagccccttggggaaacatatactggcattggaggcatt
cccgagaaggctcgctcagttgcccttgcttatggaggatccgtcaaaagggagaaactg
agtactttgggcatgtacttggtggaagaagaatga
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