Rhincodon typus (whale shark): 109920872
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Entry
109920872 CDS
T06055
Name
(RefSeq) troponin C, skeletal muscle isoform X1
KO
K12042
troponin C, skeletal muscle
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04020
Calcium signaling pathway
rtp04814
Motor proteins
rtp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
109920872
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
109920872
04820 Cytoskeleton in muscle cells
109920872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
rtp04812
]
109920872
Cytoskeleton proteins [BR:
rtp04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
109920872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
SPARC_Ca_bdg
TerB
EF_EFCAB10_C
DUF1456
Syntaxin
SurA_N_3
p25-alpha
CmlA_N
Motif
Other DBs
NCBI-GeneID:
109920872
NCBI-ProteinID:
XP_020376530
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All DBs
Position
19:48365901..48380214
Genome browser
AA seq
162 aa
AA seq
DB search
MPMTEQQADARSYLSEEMIAEFKAAFDMFDADGGGDISTRELGQVMRILGQNPTREELDA
IIEEVDEDGSGTIDFEEFLVMMVRQMKEEAKGKSEEELAEVFRVFDFNADGFIDRDELIE
VLKGAGEHVSEEEIDELIREGDKNNDGKLDFDEWVKMMENVQ
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgacagagcaacaagcagacgcgaggtcttacctcagcgaggaaatgatcgct
gagttcaaggccgcgtttgacatgtttgatgctgatggtggtggtgacatcagcaccagg
gaattgggtcaagtaatgagaatcctgggtcagaacccaaccagggaagagttggatgcc
atcattgaggaagtggatgaagatggaagcggcaccattgactttgaagagttcttggtg
atgatggtgaggcagatgaaagaggaggcaaaaggaaaatctgaagaagagttggcagaa
gtctttcgtgtatttgatttcaatgctgacggtttcatcgatcgtgatgagctgattgag
gtcctcaagggtgctggggagcatgtttcagaggaagaaattgatgaacttataagggag
ggggacaagaacaatgatggcaaacttgactttgatgaatgggtgaagatgatggagaat
gtccaataa
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integrated database retrieval system
