KEGG   Rhincodon typus (whale shark): 109927627
Entry
109927627         CDS       T06055                                 
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109927627
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rtp03041]
    109927627
   03036 Chromosome and associated proteins [BR:rtp03036]
    109927627
Spliceosome [BR:rtp03041]
 Complex B
  Other components
   Prp19-related factors
    109927627
 Complex C
    109927627
Chromosome and associated proteins [BR:rtp03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     109927627
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT_PRP39_C TPR_14 Suf TPR_19 HAT NRDE-2 TPR_17 UTP6_C Mad3_BUB1_I
Other DBs
NCBI-GeneID: 109927627
NCBI-ProteinID: XP_048448554
LinkDB
Position
Unknown
AA seq 422 aa
FDRVRVIYKYALDRIAKQKAQELFKNYTVFEKKFGDRRGIEDVIVSKRRFQYEEEVKANP
HNYDAWFDYLRLVESDGDLDTVHEVYERAIANVPPIQEKRHWRRYIYLWINYALFEELEA
KDPEKTRQVYQACLELIPHKKFTFAKLWLLYAQFEVRQKNLSLARRALGTGIGKCPKNKL
FKGYIELELQLREFDRCRKLYEKYLEFSPENCTTWIKFAELETILGDVERARAIYELAIG
QPRLDMPEVLWKSYIDFEIEQEEYERTRNLYRRLLQRTQHVKVWISYVQFELSVDVPERI
SRCRQIYEDANRSLRNCEEKEERLIFLESWRDFEAEFGTESSQERVRKLMPGRVKKRRKL
QAEDGTDAGWEEYYDYIFPEDAANQPNLKLLAMAKLWKKQLRDEKEPEDNPDKDTDENET
ES
NT seq 1269 nt   +upstreamnt  +downstreamnt
tttgatcgagtgagagttatctacaaatacgcacttgatagaattgccaaacagaaggct
caagagctcttcaaaaactatacagtttttgagaaaaagtttggggacaggagaggcatt
gaagatgttattgtcagcaaaagacgcttccagtatgaagaggaagtcaaggcaaatcca
cataattacgatgcctggttcgactaccttcgactagttgaaagcgatggagatcttgat
actgtacatgaagtgtatgagcgtgcaatagccaatgtaccacccattcaggaaaagagg
cactggaggagatatatttacttatggatcaactatgctttgtttgaagaattggaggca
aaggatccagagaagactagacaagtgtatcaagcatgcttggaactcatccctcataag
aagttcacatttgctaaattgtggctgctatatgcacaatttgaagttcgacagaagaac
ctgtctctcgccaggagggctttaggtactggcataggaaaatgtccaaagaacaagctg
ttcaaagggtacattgaactagagctccagcttcgtgagtttgatcggtgtaggaaactc
tatgaaaaatacctggagttttcaccagagaactgcactacttggattaagtttgctgaa
ttggagactattctgggtgatgttgaacgtgctcgtgccatctatgaactggcaattggc
caacctagactagatatgccagaggttctttggaagtcttatatagactttgaaattgag
caggaagaatatgaaagaacaagaaacctgtacaggcgcctacttcaacgtactcagcac
gttaaggtatggatcagttatgttcaatttgaactttcagtggatgtgccagaacgcata
tccagatgccgacaaatttatgaggatgccaacagatctttacggaactgtgaggaaaaa
gaagagcgactcatattcttggagtcctggagggactttgaagcagaatttggcacagag
tcttcacaagaaagggtgcgaaaactcatgccaggacgtgtcaagaagaggagaaaactg
caggcagaagatgggacagatgctggttgggaagagtattacgattacatcttcccagaa
gatgctgccaatcaaccaaacctcaaactgcttgcaatggccaagctttggaagaaacag
ctgcgcgatgagaaagaaccagaagataatcctgacaaagatacagatgaaaatgagact
gaatcatga

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