Rhincodon typus (whale shark): 109927719
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Entry
109927719 CDS
T06055
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-3 isoform X1
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04080
Neuroactive ligand-receptor interaction
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
109927719
04082 Neuroactive ligand signaling
109927719
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rtp04040
]
109927719
Ion channels [BR:
rtp04040
]
Ligand-gated channels
GABA-A
109927719
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
109927719
NCBI-ProteinID:
XP_020383300
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All DBs
Position
11:42994618..43019883
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AA seq
465 aa
AA seq
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MLFFWGLLFLTLFPVAMEKGSASHSKKHHQQPKSEDIKQKSRPESKRSDSTKTHLTKSEQ
LLRIEDHDFAMRPGFGGAAVSVGIDVQIESIDSISEVDMDFTMTLYLRHYWKDSRLAFPS
SNNRSMTFDGRLVKKIWVPDVFFVHSKRSFIHDTTMENIMLRVYPDGNILYSLRTTVTAM
CSMDFSSFPLDTQNCSLELESYAYNEKDLMLHWKNEKEPLKTDEQILLAQFFIQEFRASS
GLAFYSSTGWYNRLFINFILRRHIFFFLLQTYFPTMLMVMLSWVSFWIDRRAVPARVSLG
ITIVLTMSTIITGVNASMPRVSYVKAVDIYLWVSFLFVFLSIIEYAAVNYLTTIEERKRM
KQREKFSDSFRLNQTQTMAFDGCYHDSQLDLSDYAEARLSVANTEARERVSCSNPDGQQL
RRKKSIKGNVTAVMIKNNHVIDTYSRVLFPTAFILFNFIYWCLFS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcttctgggggctgctgtttctcaccttgtttccggttgcaatggagaagggc
agtgccagtcatagcaaaaaacaccaccagcagcccaaatctgaggacatcaaacagaaa
agtagaccagaaagtaaaagatctgattcaactaaaacacacctgacaaaatctgaacaa
cttcttagaatagaggaccatgattttgcgatgagacctggatttggaggagcagcagta
tctgttggtatagatgtccagatcgaaagcattgacagcatttctgaagttgatatggac
tttacaatgactttgtatctaagacactactggaaagatagcagactcgcttttccaagt
tccaacaacagaagtatgacatttgatggaagattagtcaagaaaatttgggttccggat
gtgttttttgttcactccaaaagatctttcatacatgacacaactatggagaacatcatg
ctaagggtatatccagatggcaacatcctgtacagtttaagaactacagtcactgccatg
tgttcaatggattttagcagctttccccttgatactcagaactgctcactggagcttgaa
agttatgcttacaatgaaaaagatctaatgctccattggaagaatgaaaaggaaccactg
aagacagatgaacagattttacttgctcagtttttcatacaagaatttcgtgcatcaagt
ggacttgcattttatagcagcactggttggtacaacagattgttcattaatttcatcctg
aggagacacattttcttttttcttttacaaacctactttccaaccatgttaatggtcatg
ttatcttgggtttccttctggattgacagaagagcagtcccggctcgggtttcactggga
ataacgattgttttaactatgtcaacaattataactggagtgaatgcatcaatgcctcga
gtctcttacgttaaagctgtggatatctacctctgggtcagctttctctttgtcttcctt
tctataattgaatatgcagctgtaaactatctaaccactattgaagaaaggaaaagaatg
aaacagagagagaagttttcagattcctttaggttgaatcagacgcaaactatggctttt
gacggctgctaccatgatagtcagctggatctgtcagactatgctgaagcccgtttaagt
gtagcaaacactgaagccagagaacgtgtatcctgttcaaatccggatggtcaacagttg
aggagaaagaaatctattaaggggaatgtcactgcagttatgataaaaaataatcatgtt
attgatacttactcgagggttttatttcctacagcatttattctttttaattttatttat
tggtgcttattttcataa
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