Rhincodon typus (whale shark): 109930856
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Entry
109930856 CDS
T06055
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3 isoform X1
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
109930856 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109930856 (slc6a11b)
Transporters [BR:
rtp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
109930856 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
109930856
NCBI-ProteinID:
XP_048462312
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Position
16:20578894..20714665
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AA seq
401 aa
AA seq
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MTAEKAIPIINGKPDDAMDTEASNVNLVRTNDKKVSDRGQWNNKIEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVIFFIGCGIPVFFLETALGQYTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVFYIIVLAWAIFYLFNCFTTELPWATCGHTWNTENCVEFQKLNSTNCT
HAAVPNATSPVIEFWERRVLGLSSGIDHIGSVRWELALCLLAAWIICYFCIWKGPKSTGK
VVYVTATFPYLMLLVLLIRGVTLPGAGEGIKFYLYPDISRLSDPQVWLDAGTQIFFSYAI
CLGCLTALGSYNPYHNNCYRDCVMLCCLNSGTSFVAGFAIFSVLGFMAFEQGVPIAEVAE
SGPGLTFIAYPKAVTMMPLAPLWAVLFFLMLIFLGLDSQVK
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacagcggagaaagcgattcctataatcaatgggaagccagacgatgcgatggacacc
gaggcatcgaacgtcaatttagttcgtaccaacgacaagaaagtgtcagacagaggccaa
tggaataacaaaatcgaatttgtcttgtctgtggctggggagatcattggattaggaaat
gtgtggcgattcccatacctctgttacaagaacggaggcggggccttccttattccatat
gtgatttttttcatcggctgcggcataccggtgtttttcctggagactgcactgggccag
tataccagcgagggaggaataacgtgctggaggaaagtttgtccgctttttgaaggtatc
gggtatgctactcaggtgattgaagcacatttgaatgtgttttacatcattgttttggcc
tgggccatattttacctgttcaactgctttacaactgaactcccttgggctacctgtgga
catacttggaacacagaaaactgtgtagagtttcagaagctgaattctaccaattgcact
cacgcagctgtaccaaatgcaacttctcctgtcattgagttctgggaacgtagagtgctt
ggattatcaagtggaattgaccacattggaagcgtacgatgggaactggctctttgtctt
cttgctgcttggattatctgttatttctgcatttggaagggaccaaagtccactggaaag
gtggtgtatgtaacagcaacattcccctatctgatgctgctggttttattgattcgagga
gtgactctacctggagctggagagggaataaagttttacctttacccagacatctcacgt
ctgtcggatcctcaggtctggctggatgctggcacccagattttcttctcatatgcaatt
tgccttggatgtttgactgcattaggaagctataatccctatcataacaactgttacagg
gattgcgtaatgctatgctgtctcaacagtggcaccagcttcgttgctggttttgctatt
ttctctgtgttaggattcatggcttttgaacaaggagtgccaatagcagaagtagctgaa
tcaggtcctggtctgacattcattgcttatccgaaagctgtcacaatgatgcctcttgca
ccactatgggctgttcttttctttttgatgctcattttccttggactggacagtcaggta
aaataa
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