Rhincodon typus (whale shark): 109932145
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Entry
109932145 CDS
T06055
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109932145 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rtp03019
]
109932145 (thoc7)
03041 Spliceosome [BR:
rtp03041
]
109932145 (thoc7)
Messenger RNA biogenesis [BR:
rtp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109932145 (thoc7)
Spliceosome [BR:
rtp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109932145 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
UPF0193
KIF21A
OVT1
DASH_Dad2
COG6_N
Peptidase_S10
FapA
Motif
Other DBs
NCBI-GeneID:
109932145
NCBI-ProteinID:
XP_020386970
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All DBs
Position
16:complement(34806624..34836974)
Genome browser
AA seq
211 aa
AA seq
DB search
MFARPGAAMSVTDDEVIRKRLLIDGDGAGDDRRINLLLKSFIKWCNSGSQEEGYSQHQRM
LGTLGQCEFSMGKTLLVYDMNLREMLNYEKISKDIESNIAAAHDKISECKKQILQAKRIR
KNRQEYDALAKVIQQHPDRHETLQQLEALGKELEHLSHIKESVEDKLELRRKQFHVLLST
IHELQQTLESDEKLSEGEDSPETRMEMQNGH
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctcggcctggagccgccatgtcggtcactgacgatgaagttatacgtaagcgg
cttctaattgatggagatggcgctggagatgatcgacgcattaacctactgctgaaaagc
ttcattaagtggtgtaattcaggatctcaagaggaggggtatagccaacaccagcgcatg
cttggtacattggggcagtgtgaattttccatggggaaaacattgcttgtatatgatatg
aacctgcgggaaatgctgaactatgagaaaatctcaaaagacatagaaagtaacattgca
gctgcacatgacaagatctcagaatgcaagaaacagattttacaagcaaaacgaattcgg
aaaaatcgtcaagagtatgatgcattagcaaaagtgatacaacagcatcctgatagacat
gaaactttacagcagttggaggcattgggcaaagaattagaacacctttctcatattaag
gagagtgttgaagataagcttgaactaagaagaaaacaattccatgttctactcagtact
atacatgaattacaacaaacactggaaagtgatgagaaattgtccgaaggtgaggactct
cctgagactcgcatggagatgcaaaacggacattag
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