Rhincodon typus (whale shark): 109935275
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Entry
109935275 CDS
T06055
Symbol
abcg2a
Name
(RefSeq) broad substrate specificity ATP-binding cassette transporter ABCG2 isoform X1
KO
K05681
ATP-binding cassette, subfamily G (WHITE), member 2
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
109935275 (abcg2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtp02000
]
109935275 (abcg2a)
04147 Exosome [BR:
rtp04147
]
109935275 (abcg2a)
04090 CD molecules [BR:
rtp04090
]
109935275 (abcg2a)
Transporters [BR:
rtp02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
109935275 (abcg2a)
Exosome [BR:
rtp04147
]
Exosomal proteins
Exosomal proteins of breast milk
109935275 (abcg2a)
CD molecules [BR:
rtp04090
]
Proteins
109935275 (abcg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
AAA_21
AAA_23
SMC_N
AAA_29
AAA_18
Colipase_C
DUF87
nSTAND1
DUF2070
Motif
Other DBs
NCBI-GeneID:
109935275
NCBI-ProteinID:
XP_020389530
LinkDB
All DBs
Position
1:complement(174492644..174566080)
Genome browser
AA seq
664 aa
AA seq
DB search
MDDSSAIREVPMNDVSITLEQTPPEPATHLKSTGSTVSFYNIYYRVKVNSGLPCCRKINV
KEILDGVNGIMGPGMNAILGPTGSGKSSLLDILAARKDPSGLKGQVLIDGAPQPPNFKCI
SGYVVQDDVVMGTLTVRENLQFSAALRLPKSICNAEKNNRIDQVINELGLMKVADSKVGT
PFTRGVSGGERKRTNIGMELIIDPSVLFLDEPTTGLDAGTALTVLLLLQRMSRKGKTIIF
SIHQPRYSIFKLFGSLTLLANGRLVYHGPSAEALDYFSGIGYTCEPFNNPADFFLDVING
DLFAVSTHKALDSYPEIVGNSSDLNKKTTIAENLASEYLKSRYYSEMMSELNKLSQGNAS
NSEPATRRITYTTSFLHQLKWVTKRSFKNLLRNPHASVAQVMVTLVLGLIVGAIYFGVQD
DNAGIQNRAGAIFFLTTNQCFGSLSVIELFIAEKKIFMHEYISGYYRIHAYFIAKLFVDL
IPMRALPAITIVTASYFLIGLKLQAGAFFIALLTLAQVSVTAASLGLAIATGQNTTAAAT
LMITVIFVLMILFSGLLVNLPSVVVWLNWLKYFSIPRYGVTALQVNEFVGLKFCNNSESV
SIAKENNHSMNFELIICTGEEFLAKQGIEATEWALWQNHLALAGIMLICFMISFLKLRFM
KKTS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagcagcgccatcagagaggtgccaatgaatgatgtatccattacgttggaa
cagactcctccagagccagccacacatttgaaatctacaggatcgacagtcagcttctac
aacatttactacagggtgaaagtcaacagtggtttaccatgctgccgtaaaatcaatgtg
aaggaaatcctagatggagtcaatggtatcatgggacctggaatgaacgctatcctaggt
cctacaggaagtggaaagtcttcgttactagatattttggctgcaaggaaagatccttct
ggcttgaaaggacaagttctaattgatggtgctccacaacctcctaacttcaagtgtatc
tctggatatgtcgtgcaggatgatgtggtaatgggaacactgacagtgagagagaatctc
cagttttccgctgcgctgcgtttaccaaagagtatctgcaatgcggaaaagaataatagg
attgaccaggtcattaatgagcttggactgatgaaagtggcagactccaaggttggaact
ccgtttactaggggagtgtctggtggagaaagaaagaggacaaatattggaatggagctg
atcattgacccatctgtcttgtttttggatgaaccgactactggtttggatgctggcaca
gcgctcactgtcctgctgctgctacaaaggatgtcgaggaaaggcaaaacaattattttc
tcaatccaccagcccagatattctatttttaagctgtttggcagcctgactcttctggcc
aatggcagattggtttaccatggtccttctgcagaggcactggattatttttcagggatt
ggatacacctgcgagccatttaacaaccctgctgatttttttcttgacgttatcaatgga
gacttatttgcagtaagcacacacaaagctttagacagttatccagaaattgttggtaat
tcttctgatttaaacaaaaagaccactattgcagagaacctagcaagtgaatacttgaaa
tcccgctattacagtgaaatgatgtctgaattaaacaagctatctcagggaaatgcttca
aattctgagcctgctactaggaggatcacatacacaacatcattccttcaccaactgaaa
tgggttactaaacgatccttcaaaaaccttctcaggaatccccatgcctctgttgcacag
gtgatggtcacacttgtcctggggctgattgtgggagccatatattttggagtgcaagat
gataatgcaggtattcagaacagggcaggtgcaattttcttcctgaccaccaatcagtgt
ttcggcagcctgtctgttatcgagctgttcattgcagaaaagaagattttcatgcatgaa
tatattagtggctattacagaatacatgcatacttcatagcaaagttatttgttgacctg
atacctatgagagcactaccagccattacaattgtaactgcaagctacttcctgatagga
ttaaagctacaggctggtgcctttttcatcgcattgttgacattagcccaagtgtccgtt
acagctgcatctctgggattagctattgcaactggacagaacactacagcagctgccacc
ctaatgattactgttatttttgttctcatgatccttttctctggcctcctggtgaacttg
ccgagtgtggtagtctggttgaactggctaaagtatttcagtatcccacgttatggcgtg
accgctctacaagtgaatgaatttgttggactgaaattttgcaacaattctgaatcagta
tctattgccaaagaaaacaaccacagcatgaactttgaactaattatatgcactggagaa
gaattccttgccaaacaaggaattgaagcaactgaatgggccttgtggcagaatcatcta
gcattggctggcataatgcttatttgtttcatgatttccttcttgaaactccgattcatg
aagaaaacgtcataa
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