KEGG   Rhincodon typus (whale shark): 109935721
Entry
109935721         CDS       T06055                                 
Symbol
sf3a3
Name
(RefSeq) splicing factor 3A subunit 3
  KO
K12827  splicing factor 3A subunit 3
Organism
rtp  Rhincodon typus (whale shark)
Pathway
rtp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rtp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109935721 (sf3a3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rtp03041]
    109935721 (sf3a3)
Spliceosome [BR:rtp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109935721 (sf3a3)
 Complex B
    109935721 (sf3a3)
 Complex C
   U2 SnRNP specific factors
    109935721 (sf3a3)
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd
Other DBs
NCBI-GeneID: 109935721
NCBI-ProteinID: XP_020389981
LinkDB
Position
27:27528636..27567578
AA seq 500 aa
METILEQQRRYHEEKERLMDVMVKEMMVKKSTLRDQINSDHRARAVLDRYMEVAGNLRDL
YEDKDSMRKDELNAISGPNEFGEFYNRLKMIKEFHRKHPNEISIPMSVEFEELMKTRDNP
SEEAQNLVEFTDEEGYGRYLDLHDCYLKYINLKGSEKCDYITYLITFDQLFDIPKERKNA
EYKRYLEMLLDYLQDYTDRVKPLLDQNELFGKIQIDFEKKWENGTFPGWPKETSSALTHA
GAHLDLSAFSSWEELASLGLDRLKSALMALGLKCGGTLEERAQRLFSTKGKSLEALDPSL
FAKSKSKGTKKDSERNKEIAFLEAQVYEYIEILGEQRQLTRENVQRKQARTGEEREEEEE
EHVSESESEDEENEIIYNPKNLPLGWDGKPIPYWLYKLHGLNINYNCEICGNYTYRGPKA
FQRHFAEWRHAHGMRCLGIPNTAHFANVTQIEDAVSLWAKLKHSKAAERWQPDTEEEYED
SSGNVVNKKTYEDLKRQGLL
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggagactatcctggagcagcagcgccgttaccatgaggagaaggagcggctgatggat
gtgatggtgaaggagatgatggtgaagaaatccacgcttcgggaccaaatcaattccgat
catcgggccagagcagtgcttgataggtacatggaagtggcaggaaatctaagagacttg
tatgaagataaagatagtatgcgaaaggatgagttaaatgccatttcaggaccaaatgaa
ttcggagaattctacaatcggctgaagatgatcaaagaattccacagaaaacacccaaat
gagataagtattccgatgtcagtagaatttgaggagttaatgaagaccagggataatcca
agtgaggaggcacagaatctagtggagttcacagatgaggaaggatatggacgttatctc
gaccttcatgactgttatctcaaatacatcaacctgaaaggttcagagaaatgtgattat
attacctacttgattacatttgaccaactttttgatattccaaaagagagaaaaaatgca
gagtataaacggtatctggaaatgttgttggactacctccaggattatactgaccgtgtg
aagcctttattggatcagaatgagctctttggaaaaatacaaattgactttgagaaaaaa
tgggaaaacggcacctttcctggctggccaaaagaaacaagcagcgccctgactcatgct
ggagctcatttagatctgtcagctttctcatcctgggaagaattggcttccttggggttg
gacagactgaaatctgccttaatggctttgggtctgaaatgtggtggaaccttagaagag
agagcccagaggttgttcagtactaaagggaagtctctggaggcactggacccttcacta
tttgcgaagtctaaatctaaaggcactaagaaggactcagaacgcaacaaagaaattgct
tttcttgaagctcaagtgtacgaatacatagaaattcttggggaacagagacagctcacc
agagaaaacgtacaacgcaaacaagctcggactggtgaggaacgagaggaggaggaagag
gagcatgtcagtgagagtgaaagtgaagatgaggaaaatgaaataatctataatcccaag
aatctgccattgggttgggatggcaagcccattccatattggttgtacaagctgcatggt
ttgaacatcaactataattgtgaaatctgtggaaattatacatacagaggacccaaagca
ttccagcgccattttgctgaatggcgccatgctcatggcatgaggtgtcttggaatccct
aacacagcacatttcgcaaatgtcacccaaattgaggatgctgtatccttgtgggcgaaa
ctgaagcattcaaaggcagcagagagatggcagccagacacagaggaagaatatgaagac
tcaagtggaaatgtagttaataagaaaacctatgaagatttgaaacgacaagggttgctg
taa

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