Rhincodon typus (whale shark): 109936009
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Entry
109936009 CDS
T06055
Name
(RefSeq) bromodomain and WD repeat-containing protein 3-like
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
rtp
Rhincodon typus (whale shark)
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rtp04121
]
109936009
Ubiquitin system [BR:
rtp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109936009
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
McrBC
Motif
Other DBs
NCBI-GeneID:
109936009
NCBI-ProteinID:
XP_048460900
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All DBs
Position
14:60880062..60957180
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AA seq
903 aa
AA seq
DB search
MRLCTFQDPRLEFDFDFRTAGDGDVVEQVISQQTDDQYENGQEPSLLDDAIRELQREHDL
RQGNEGAAVPDGPYSRSNLRNSALLSPIGLRRSGQIEGVRQMHNNAPRSQMATERDLMAW
SRRVVVMELPPGISRFQEELRLSKGDGEINLYTIEKKRKPLQPTQKSDGQEFFQRTGRRT
QRRNQHFYHTRSTVERRTCIRRIEESNNSSEEMETIDGSEGSSDEVEEEWQSESSSSDSS
SEYSDWTADAGINLQPPKRLVRGIVRHNSSSEDEKLGERLTLKRKKSKQSKQKRPSELLA
MEGAPSEEWIPPSWIRDTTPRRSPFVPQMGDEVVYFRQGHEAYVKAVKKAKVYSVNLQKQ
PWIKLELREQEIVKVVGIKYEVGPPTLCCLKLSLLDPITGKMTGESFSLKYHDMPDVIDF
LVLRQFYEEAKKRNWQVGDTFRSIIDDAWWFGTVQSQQPFQPEYPDSLFQCYNVCWDNNE
LEKMSPWDMEPIPDDAIYPEEIGASVPVTPEELKRLLYKPQEGEWGSSSADEQHKRIIQG
ISQLMTLEIAAPFSAPVDLCAYPLYCTVVAYPTDLSTIKKKLENGFYRTVSALMWEVRYI
EHNARTFNELDSPIVKSAKLITDTLLQFIGDQSCTNMLELYEKVKAEELSSDENDKEMAA
ELDSDAPGTSSDTIHRLPRQLNRRPALSIDVNAWKEQCREFLNLMFQCEDSEPFRQPVDL
FAYPDYRDIIDVPMDFNTVKETLEEGNYETPLEFCKDVRLIFSNAKAYTPNKKSRIYSMT
LRLSALFETQITKIISDYKSALKCQKKNKPRQKYRKRFKSSSSSSSSSSTSSSRSGSRSS
SRSGSRSSSRSGSRSSSRSRSGSGCSSRASSLARELTNTPPKEDLNISPSCSVRAITSRT
TPE
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaggctttgtacattccaggatccgagacttgagtttgactttgattttcggactgcg
ggtgatggtgatgtagtggagcaggtcatcagccaacagacagatgatcagtatgagaat
ggccaggaacccagccttctagatgatgctattagggagctccagcgagaacatgacctg
aggcagggaaacgaaggagcagctgtaccggatggcccttacagtagatcgaacttgcgg
aacagtgccttgctgtcccccattggacttcgacggagtggtcaaatagaaggtgttcgc
caaatgcataataatgcccctcgtagtcagatggctacagagagagacctgatggcttgg
agccgaagggtggtagtcatggagcttccacctggaattagcaggtttcaagaggaactt
cgactaagtaaaggcgatggagaaattaacttgtacacaattgaaaagaaacgtaaacca
ctgcaaccaacacagaagagcgatggtcaggaatttttccagcgcacagggaggcggact
caacgccgtaatcagcatttctaccacactcgttcgactgtggaacgtcgaacttgtatt
cgtcggatagaagaatctaataattcttcagaggaaatggagactatagatggaagtgag
gggtcatctgatgaggttgaagaagagtggcagagtgaaagcagttcaagtgattcatca
agtgaatattcagattggacggcagatgctggtattaacttgcaaccacccaaacgattg
gtgagaggaatagtacgtcataatagcagctctgaagatgagaagctgggagaaagattg
actctaaaacgcaagaaatccaaacagtccaaacagaagaggccgagtgaactacttgcc
atggaaggtgcaccttctgaagaatggattcctccatcttggatccgagatacaacacca
cgcagatcaccatttgtgccacaaatgggtgatgaggttgtatattttcgacaagggcat
gaagcgtatgtgaaagctgttaaaaaagcaaaagtctacagtgtaaaccttcagaagcaa
ccgtggatcaaattggaacttagggaacaagaaattgtaaaggtggttggcatcaagtat
gaagttgggccacctactttatgttgtctgaagctttctcttctagaccccatcactggc
aaaatgactggagaatctttctctctcaagtatcatgatatgccagatgtcattgacttt
ttagtattgcgacaattttatgaagaagcaaaaaagagaaactggcaagttggagacacg
tttcgcagtataatagatgatgcctggtggtttggaacagtgcagagtcagcagcctttt
cagcctgaatatcctgatagtttattccaatgttacaatgtttgctgggataataacgag
ttggagaagatgagcccatgggacatggaacccattccagatgatgctatctaccctgaa
gaaattggtgccagtgttcctgttactccagaggaactgaaacgcttgttatataaacct
caggagggtgaatggggatctagttctgcagatgaacaacataagcgtatcattcaggga
atcagtcaactgatgacacttgaaatagccgcaccattctctgcccctgtggatctctgt
gcctatccactatattgcactgtggttgcatatccaacagacctaagcaccatcaagaag
aaattagaaaacgggttttataggacagtttctgccctgatgtgggaagtaagatatatt
gaacataatgctagaactttcaatgagctcgacagtccaattgtcaagtctgccaagtta
attacagacacattacttcagttcattggggaccagagttgcaccaacatgttagagctg
tatgaaaaagttaaggcagaggaacttagcagtgatgaaaatgacaaggaaatggctgca
gaattagattctgatgctccaggaacttcgtcagacacaatacatcggctcccaaggcag
ttgaacagaaggccagcgctcagtattgatgttaatgcctggaaagagcaatgcagagag
tttctgaacctcatgttccagtgtgaggactctgaaccttttagacagccagtggatctc
tttgcatatcctgactatcgggacatcatcgatgttccgatggacttcaacactgtgaaa
gaaacactagaagaaggaaattatgaaacccctctggagttctgcaaggatgttcgttta
atattcagcaacgccaaagcctacacgcccaacaagaaatcaaggatatacagcatgaca
ctcaggttgtctgccttatttgaaacacaaattacaaaaataatttcagactacaagtct
gccttgaagtgccaaaaaaagaataaaccacgacagaagtatagaaagagattcaaaagc
agcagtagtagtagcagcagcagcagcacgagcagttctcggtccggcagcaggagcagt
tctcggtccggcagcaggagcagttctcggtccggcagcaggagcagttctcggtcccgt
agtggttcaggttgcagtagcagagcatccagcctagcgcgtgaactaacaaacactcca
cctaaggaagacctgaatatctcaccgtcttgttcagttagagctattacatcaagaaca
actccagaataa
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