Rhincodon typus (whale shark): 109936777
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Entry
109936777 CDS
T06055
Symbol
nploc4
Name
(RefSeq) nuclear protein localization protein 4 homolog isoform X1
KO
K14015
nuclear protein localization protein 4
Organism
rtp
Rhincodon typus (whale shark)
Pathway
rtp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rtp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
109936777 (nploc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rtp03009
]
109936777 (nploc4)
Ribosome biogenesis [BR:
rtp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
109936777 (nploc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
109936777
NCBI-ProteinID:
XP_048466627
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All DBs
Position
23:17595616..17667895
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AA seq
612 aa
AA seq
DB search
MAENIIVRIQSPHGMKRINVGKRETGAQFLKKVAKEFGCSNNGFSVYLNRNKTGEISPTN
KSLSLLKIKHGDMLFLFPSSDAGTSTQVMETSAQAPGGSRVSTTSAVPVVEDEIDQYLMK
QDGKIYRNRDQQQCRHGALGKCVHCVPLEPFDEDYLNHLDPPVKHMSFHAYIRKLTGGAD
KGKFVALENISCKIKSGCEGHPPWPDGICTKCQPSAITLNRQKYRHVDNIMFENHTIADR
FLNFWRQTGNQRLGFLYGRYTEHTDIPLGIRAEVAAIYEPPQVGTANSLEFLEDPKAEVV
DEIAAKLGLRKVGWIFTDLLSEDTRKGTVKFIRNKDAHFLSAEECITAGDFQNKHPNVCR
LSPVNHFGSKFVTVLATGGPDNQVHFEGYQVSNQCMALVGDDCFLPCRDAPELGYVKESS
SEQYVPDVFYKDIDKFGNEITQLARPLPVEYLIIDIPTTFPKDPVYTFASSPHPFPVVNR
DVVGETQDFHTLASYLSQNQSAVFLDVISDFHLLLFLVTNDVMPLRDSINLLLEAVKTRN
EELAQTWKRSEQWATIEQLCSTVGVQPHSASDYGALGGSPQSAPTAMWSCRHCTFMNHPG
TDQCEMCNLPRI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacatcattgtccgtattcagtcaccacatggtatgaaacggattaacgtg
ggaaaacgagaaacaggagcccaatttttgaaaaaggttgcaaaggaatttggctgttct
aacaatggcttttctgtataccttaacagaaataaaactggagagatctccccaacgaat
aaatcactgtctttgcttaaaattaaacatggagacatgctattcctctttccatcaagt
gatgctgggacttccactcaagttatggagacttcagctcaagctcctggagggtctcga
gtttcaaccacgtctgcagtgcctgttgtggaggatgaaattgaccagtacttaatgaaa
caggatggaaagatctacagaaaccgggaccagcaacagtgtcggcatggagcgctgggt
aaatgtgttcattgtgtaccactggagccttttgatgaggattaccttaatcatttggac
ccacctgttaaacacatgtcattccatgcatacatccgaaaactgactggtggtgctgat
aaaggcaagtttgttgctttggagaatattagctgcaaaatcaaatctgggtgtgaagga
catcctccgtggcctgatggaatttgtacaaagtgccaaccgagtgccataactcttaac
agacagaaatacaggcatgtggacaacataatgtttgagaatcatacaatagcagaccgt
ttcctcaacttctggcgtcaaacaggaaaccagcgccttgggttcctttatggtcgctac
accgagcacacggacattcctctaggtattcgagcagaggttgctgccatctacgaacct
ccacaggttggtacagcaaacagcttagaatttttggaagacccaaaagctgaagttgta
gatgaaattgctgctaaacttggattaaggaaggttggttggatattcacagatctacta
tcagaggacacaagaaaaggtactgtcaagtttatcaggaataaggatgcgcattttcta
agtgcagaagaatgcattacagcaggagatttccaaaataaacatcccaatgtttgccgc
ctatctcctgtcaatcattttggatccaaatttgttaccgtcttggcaacaggtggccca
gataatcaggttcattttgaaggttaccaagtttccaatcagtgtatggctctcgtaggc
gatgactgttttctaccatgcagagatgcaccagagctgggatatgtgaaggagtcttct
agtgagcaatatgttcctgatgttttctataaggacatagacaaatttggtaatgaaatc
acacagttagcaaggccattgccagttgagtacctgatcatagatattcctacgactttt
ccaaaggatcctgtttacacttttgcttcatccccacatccctttcctgttgtgaacagg
gatgtcgtcggagagacacaggatttccatacccttgcctcctacctatcacagaatcag
tctgctgtctttcttgatgtcatctcagatttccacctacttctatttctggtaaccaat
gatgttatgccactcagggatagtatcaacttgttgttggaagcagtgaaaacacggaat
gaggagcttgcccagacctggaagagatcagagcaatgggctaccattgaacagctctgc
agtacagtgggtgttcagccacacagtgcttctgattatggtgcactgggagggtctcca
cagtctgctcccactgcgatgtggtcctgtagacattgcaccttcatgaaccacccaggc
actgaccaatgtgaaatgtgcaatcttcctcgaatctag
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