Rhizobium tropici: RTCIAT899_CH13790
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Entry
RTCIAT899_CH13790 CDS
T02432
Name
(GenBank) resistance nodulation cell division (RND) efflux pump, inner membrane component
KO
K18138
multidrug efflux pump
Organism
rtr
Rhizobium tropici
Pathway
rtr01501
beta-Lactam resistance
rtr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rtr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RTCIAT899_CH13790
01503 Cationic antimicrobial peptide (CAMP) resistance
RTCIAT899_CH13790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rtr02000
]
RTCIAT899_CH13790
01504 Antimicrobial resistance genes [BR:
rtr01504
]
RTCIAT899_CH13790
Transporters [BR:
rtr02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RTCIAT899_CH13790
Antimicrobial resistance genes [BR:
rtr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RTCIAT899_CH13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Orf78
Motif
Other DBs
NCBI-ProteinID:
AGB72136
LinkDB
All DBs
Position
2770023..2773343
Genome browser
AA seq
1106 aa
AA seq
DB search
MNFSAWSIRNPVAPLLGFFLLMVVGAHAFFNLPITRFPNIDVPIVNVTVTQSGASPAELE
MQVTKEIEDAVASINGIDEIQSTVTDGQSQTVVVFRLEVPTEQAVQDTKDAIDRIRGNLP
STIDEPIVSKVDVVGQAIQSFAVSSPNMTLEELSWYVDDTVKRALQGKAGIGRVDRYGGA
DREVRIELDPNKLNAYGITALSVSQQLRSTNIDLGSGRGQVAGSEQAIRVLGDARNVAQL
ADTTIALTNGRFVKLSDLGAIKDTYQEPKSFSRFNSAPVVTFGVFRAKGASEVTVAKTVA
DTLDKVRAENPNVSIEMIDDSVYYTYGNYESAMHTLIEGAILAVIVVFLFLRNWRATLIS
AVALPLSAIPTFWIMNQIGFSLNLVSFLALTLATGILVDDAIVEIENIARHIKMGKTPYR
AAIDAADEIGLAVIATTFTIIAVFVPVSFMPGIPGQYFIQFGLTVAFSVFFSLLVARLIT
PMMAAYLMRAEDGVDDHHDNDGRFMRGYSWLVRLTTKKWYTRYPTLLAAFAFSIASVFAL
IMFVPGSFIPPEDASRIVLSAELPPNARLDDTEQATNEIYRRVKSIDGVESVFVLGGASP
KGDLELRRATVTLTLGKLDQSLAKKLVNDVLGSLPVIGPHLPKVTVHGRVRPQWDIEKEV
FAKLSSIPDVRITKLNDRGDRDLTYNFLSRSEKDLNQAVGILEAKLRTDPALANVSADGA
LPRPELQIYPRKDEAARLGITPQMISDTIRVATIGDIDASLAKISLDDRQIPIRVQASLG
MRRDLAAIRALRIKTATGNTVPLSSVADIDYSEGLSSIKRNNRFRVVAIGADLPQGVALD
TASEHFLEIVNNAKIPATVHLAESGDTKVQKEMQQSFGNAMLLGLMLVLTVLILLFKDVI
QPFTILLSLPLAIGGVALALIMTGNALSMPVMIGILMLMGIVTKNAILLVDFAIEMMHQG
MPRLEAVVEAGRKRARPIIMTSIAMSAGMLPSALGVGEGGSFRAPMAIAVIGGIIVSTVL
SLVVVPSFFLIMDDLSRLLGYLFGRLVGRKDVDDEVITKEGLAVAVNENRQSLTSLEERL
EAIENKDGRSRSVGTNVLKLPPFAAE
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccgcctggtccattcgaaatccggtcgccccgctcctcggcttcttcctg
ctgatggtggtgggcgcgcacgccttcttcaatctgcccatcacccgcttcccgaacatc
gacgtgccgatcgtcaatgtcaccgtgacgcagagcggcgcctcgccggccgagctcgaa
atgcaggtaacgaaggagatcgaagacgccgtcgccagcatcaacggcatcgacgaaatc
cagtcgaccgtcacggacggccaatcgcagaccgtcgtcgtcttccggctggaagtgccg
accgagcaggccgttcaggataccaaggatgcgatcgaccgcatccgcggcaatctgccg
tcgaccatcgacgagccgatcgtctccaaggtcgatgtcgtcggccaggcgatccagagc
tttgccgtgtcctcgccgaacatgacgctcgaagagttgtcctggtatgtggacgatacg
gtcaagcgcgcgcttcagggcaaggcaggcattggccgcgttgaccgctatggcggcgcc
gaccgtgaagtgcgcatcgagctcgatccgaacaagctgaacgcctatggcataacggcg
ctttcggtgagccagcagcttcgcagcaccaatatcgatctcggctccggccgcggccag
gttgccggcagcgagcaggcaatccgcgtgctcggcgacgcccgcaacgtcgcccagctc
gccgatacgacgatcgctctgaccaacggccgcttcgtcaagctctccgatctcggcgcc
atcaaggacacctatcaggaaccgaagtccttttcgcgcttcaacagcgcccccgtcgtc
accttcggcgtattccgcgccaagggcgccagcgaggtgacggtcgccaagacggttgcc
gacacgctcgacaaggtgcgcgcagagaatccgaacgtctcgatcgagatgatcgacgac
tccgtctactacacctatggcaactacgaatccgcgatgcacacgctgatcgaaggcgcc
atactggccgtcatcgtggtgttcctgttcctgcggaactggcgtgcgacgctgatatcg
gcagttgctctgccgctctccgcgatcccgacattctggatcatgaaccagatcggcttc
tcgctgaaccttgtcagcttcctggcattgacgctggcgaccggtattctcgtcgatgat
gccatcgtcgagatcgagaacatcgcccgccacatcaagatgggcaagacgccctatcgc
gccgccatcgatgctgcagacgaaattggtctcgccgttatcgcgacgaccttcaccatc
atcgcggtctttgtgccagtctccttcatgccgggcattccgggccagtacttcattcag
ttcggcctgacggtcgccttctcggtgttcttctcgctgcttgtagcgcgtctgatcacg
ccgatgatggccgcctatctgatgcgcgccgaagatggcgtcgacgatcatcacgacaat
gacggccgcttcatgcgcggctatagctggctggtgcggctgacgacgaagaagtggtac
acgcgttatccgacgctgcttgccgctttcgccttctcgatcgcatcggtcttcgctctc
atcatgttcgttcccggcagcttcatcccgccggaagacgcctcgcgcatcgttctgtcg
gcagaactgccgccgaacgcccggctcgatgatactgaacaggcgaccaacgaaatctat
cggcgcgtgaaaagcatagatggtgtcgaaagcgtcttcgtgctcggcggcgcctcgccg
aagggcgatctggaactgcgccgcgctaccgtgacgctgacgctcggcaagctcgatcag
tcgctggcgaaaaagctggtgaacgacgtcctcggttcgctccccgtcatcggccctcac
ctgccgaaggtcaccgtccacgggcgcgtacgcccgcaatgggacatcgagaaggaagtc
tttgcaaagctgagctccattcccgacgtccgcatcaccaagctgaacgaccgcggcgat
cgcgacctgacctataacttcctctcgcgcagcgagaaggatctcaaccaggccgtcggc
atcctggaagccaagctgcgtaccgacccggcgctcgccaatgtcagcgccgacggcgcc
ctgccgcggccggaactgcagatctatccgcgcaaagacgaggccgcgcgcctcggcatc
acgccgcagatgatttccgacacgatccgcgttgcgaccatcggcgacatcgacgcttcg
cttgcgaagatctcgctcgacgaccgccagattccgatccgcgttcaggcctcgctcggc
atgcgccgagacctggcggcgatccgcgccttgcgtatcaagactgccaccggcaatacc
gtgccgctgtcgagcgtggctgacatcgactattccgaaggcctgtcgtccatcaagcgc
aacaatcgcttccgcgtggtcgccatcggcgccgacctgccgcaaggtgtggcattggat
acggcatccgagcatttcctcgaaatcgtcaacaacgccaagattcccgcaaccgtgcat
ctggccgaaagcggcgataccaaggtccagaaggaaatgcagcagagcttcggcaatgcc
atgctgctcggcctcatgcttgttctgaccgtgctgatcctgctgttcaaggatgtgatc
cagcctttcaccattctgctctcgctgccactagcgatcggcggcgtggcattggccttg
atcatgaccggcaacgcgctgtccatgcccgtcatgatcggcattctgatgctgatgggt
atcgtgacgaagaacgctattctgctggtcgatttcgccatcgagatgatgcatcagggc
atgccgaggctggaagcggtggtcgaagccggccgcaagcgtgcccgtccgattatcatg
acctcaatcgccatgtcggccggcatgctgccatcagctctcggcgtcggcgaaggcggc
tccttccgcgcaccaatggcgattgcggtgatcggcggcatcatcgtctcgacggtactc
agcctggtggtcgtgccgtccttcttcctcatcatggacgacctgtcccgtctgctcggc
tatctcttcggcaggcttgtcggaaggaaggatgtggatgacgaggtcatcaccaaggaa
ggcttggccgtcgccgtcaacgaaaaccgccagtcgctcaccagcctggaagagcggctt
gaagccatcgagaacaaggatggcagaagcagatccgtgggtacgaatgtcctaaagctg
ccgcccttcgcggcagaataa
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