Ruficoccus sp. ZRK36: K0V07_09595
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Entry
K0V07_09595 CDS
T07427
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rufi
Ruficoccus sp. ZRK36
Pathway
rufi00260
Glycine, serine and threonine metabolism
rufi00460
Cyanoamino acid metabolism
rufi00630
Glyoxylate and dicarboxylate metabolism
rufi00670
One carbon pool by folate
rufi00680
Methane metabolism
rufi01100
Metabolic pathways
rufi01110
Biosynthesis of secondary metabolites
rufi01120
Microbial metabolism in diverse environments
rufi01200
Carbon metabolism
rufi01230
Biosynthesis of amino acids
rufi01240
Biosynthesis of cofactors
rufi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rufi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0V07_09595
09102 Energy metabolism
00680 Methane metabolism
K0V07_09595
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
K0V07_09595
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
K0V07_09595
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
K0V07_09595
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
K0V07_09595
Enzymes [BR:
rufi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
K0V07_09595
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QYY34556
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Position
complement(2190687..2191964)
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AA seq
425 aa
AA seq
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MSENKSSTLNAASLADYDPEIYNAISQECHRQQTHIELIASENFTLPAVMEAAGSVLTNK
YAEGYPGKRYYGGCDYVDVVETLAIERAKALFGADHANVQPHAGSQANIAVYTAMLNHGD
KILTMRLSDGGHLTHGSPVNFSGKNYEVVHYGVSPENGQIDYEELAEMAAKEKPKMITVG
ASAYPRSIDFEKMGEIARSVGALLMADIAHIAGLVAAGEHPNPVPHADFVTTTTHKTLRG
PRGGLIMCKAEHAKAIDMAVFPMNQGGPLMHIIAAKAVCFKDAATPEFKKYQHQIVLNAA
ALAKGLMDKGFDLCSNGTDNHLMVLDFRKSHPELSGLKAQRALDLANITTSRSSVPGDTR
KPYYTSGLRLGSPAVTTRGMGEAEMAVIAEAIAMVLNAPEDEAQITAARDKVLALAERFP
LPYKG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacaagtcctcgaccctcaatgccgcttcgctggccgactacgatcctgag
atctacaacgccatcagccaggagtgccaccgtcagcagacccatatcgagttgatcgcc
tcggagaatttcactctcccggccgtcatggaagccgctggcagcgtgctgaccaacaag
tatgccgagggctacccgggcaagcgctactacggcggctgcgactacgtggacgtagtc
gaaacgctcgccatcgagcgggccaaggccctctttggcgcggaccacgccaatgtccag
ccccatgctggcagccaggctaacatcgccgtctacaccgccatgctcaaccatggcgac
aagatcctgaccatgcgcctgtccgacggcggccacctcacccacggcagccccgttaac
ttctcgggtaagaactacgaggtcgtccactacggcgtcagcccggaaaacggccagatc
gactacgaagagctggccgagatggccgccaaggaaaagccgaagatgatcaccgtcggt
gcctcggcctacccgcgctcgattgattttgagaaaatgggcgaaatcgcccgctccgtg
ggcgcactgctcatggccgacatcgcccacatcgcgggcctcgtcgcagccggtgagcac
ccgaaccccgtcccgcacgccgactttgtcaccacgaccacgcacaagaccctgcgcggc
ccccgtggcggcctcatcatgtgcaaggccgaacacgccaaggccatcgacatggccgtg
ttcccgatgaaccagggcggcccgctcatgcacatcatcgccgccaaggccgtgtgcttc
aaggacgccgccaccccggagttcaagaagtaccagcaccagatcgtcctcaacgccgct
gcacttgcgaagggcctgatggacaagggcttcgacctttgcagtaacggcaccgacaac
catctgatggtgctggacttccgcaagagccaccccgagctatccggcctcaaggcccag
cgtgccctcgacctggccaacatcaccacctcccgcagctccgtgcccggtgacacccgc
aagccctactacacctcgggtctgcgcctgggctcccccgccgtcaccactcgtggcatg
ggcgaggccgagatggccgtcatcgccgaggctatcgccatggtgctgaatgccccggag
gacgaggcccagatcaccgctgcccgcgacaaggtgctcgccctggctgaacgctttccc
ctgccctacaagggctag
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