Runella sp. SP2: DTQ70_23250
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Entry
DTQ70_23250 CDS
T05690
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
rup
Runella sp. SP2
Pathway
rup01501
beta-Lactam resistance
rup02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rup00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DTQ70_23250
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DTQ70_23250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rup02000
]
DTQ70_23250
01504 Antimicrobial resistance genes [BR:
rup01504
]
DTQ70_23250
Transporters [BR:
rup02000
]
Other transporters
Pores ion channels [TC:
1
]
DTQ70_23250
Antimicrobial resistance genes [BR:
rup01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DTQ70_23250
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DTQ70_23250
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DTQ70_23250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AYQ34904
LinkDB
All DBs
Position
complement(5791364..5792794)
Genome browser
AA seq
476 aa
AA seq
DB search
MDIKPRNLLVILLLGGIIAGCKVPPMATQREFEPLPATFESNTDTANSAQIQWRDYFQDS
TLTALIETALVNNFDALTAIQRIEMARSNVRATEGLLRPTVWGGGSTALRRFGLYTMDGA
GNATTDIVEGKAVPTHLPDFFVGLTASWEVDIWKKLRTQREAALARYLASVEAKNWITTN
LVAGVANAYYDLLALDNEREIVRQTIGLQEEALKIVKVQKQAGVANELAVEQFEAQLLNS
QHTEVAIVQAITETENVIHGLLGRFPQPIIRDKTQLSRAVATQIQTGMPSELLKNRPDIR
AAELELMATKADLLAARAAFFPSLSLTGMLGLQAFNPKFLVTTPQSLAYSVVGNLAGPII
NRSAIVAQFNGAQAVQIEALYNYQKTILDGYIEVNNQLANLRNLAQMFDLKNREAMLLTR
SIETSSKLYRTGRASYLEVLFAQQNALQAKLVLINTQKQQQQTTVNLYRALGGGWK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggatataaaaccaagaaatctgctagtcatcctgctgttgggaggaattattgcagga
tgtaaagtgcctcctatggctacccaacgcgaatttgaaccgcttcctgccacatttgaa
agtaacacagataccgcaaacagcgcccagattcaatggcgagactattttcaagacagt
acgttgacggcgctgattgaaacagcgttggtcaataactttgatgctctaaccgccatt
caacggattgagatggcgcgttccaacgtgagagcaacggaaggattgcttagaccaacg
gtttggggaggaggctcaacggccctgcgccgttttggactatatacaatggatggcgcg
ggaaacgccacgaccgacattgtggaggggaaagctgttccaactcaccttcctgatttt
tttgtaggcttgacggcctcgtgggaagtggatatttggaaaaaacttcgcacgcaacga
gaagctgccttggcgcggtatttggcaagtgtcgaagcaaaaaattggattacgaccaat
ttggtggcgggcgttgccaatgcttattatgatttgttggcacttgacaacgagcgagaa
attgttcggcaaaccattggtttacaggaagaagcccttaaaattgtaaaagtgcaaaaa
caagcaggagtagccaacgaactggccgtagaacagtttgaagcccaacttctgaatagt
caacacacagaagtagctatagtacaggcaattactgagaccgaaaatgtcattcatgga
ctgttggggcgctttccccagccaattattcgggataaaacccaactatcgcgagcggtc
gcgacccagattcaaacgggaatgccgtcagaattactcaaaaaccgtcccgacattcga
gcggctgagttagaacttatggcaactaaagccgacttactagcagcgagggcagccttc
tttccatcgcttagcttaacgggaatgttggggttacaggcatttaatccgaaatttttg
gtgactacgcctcagtcgttggcttattcggtagtaggaaatttggcaggccctattatc
aatcgttcagccattgtcgcgcagttcaatggggcgcaagctgtgcaaattgaggcgttg
tataattaccaaaagacaattttagatgggtatattgaagtcaataaccaattggccaac
ctacgcaatttagcccagatgtttgaccttaaaaatcgggaagcgatgttgctaactcgc
tcaatagaaacgtctagcaaattgtatcgaacggggagggcgtcttatttagaagtgctt
tttgcccaacaaaatgcgttgcaggcgaaattggtgcttatcaatacccaaaaacagcag
caacaaacaacggttaacttatatcgtgctttgggtggaggctggaaataa
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