Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I00121
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Entry
RBI_I00121 CDS
T03158
Name
(GenBank) SpoIVB peptidase
KO
K06399
stage IV sporulation protein B [EC:
3.4.21.116
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rus01002
]
RBI_I00121
Enzymes [BR:
rus01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.116 SpoIVB peptidase
RBI_I00121
Peptidases and inhibitors [BR:
rus01002
]
Serine peptidases
Family S55: SpoIVB peptidase family
RBI_I00121
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_S55
PDZ_6
PDZ_2
Tricorn_PDZ
PDZ
DUF6288
Motif
Other DBs
NCBI-ProteinID:
CCO03861
UniProt:
W0U2D1
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Position
I:complement(145538..146764)
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AA seq
408 aa
AA seq
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MSSFFKKTACVTGIILLGLFGLIGFYSTTLPDFYLVSKGSELSVNSFFTISSKPCESKVT
VAVSGGSSGASRYTKNMLMLFGAVPVKEVESKTMERPMLYPCGQPFGIKLLTEGVMVVDL
QKVDSSSPAKDCGIREGDVIVSIDGEKVKSNADVAKIIRSSNGEACSVRIKRGSNDLTFK
LCPRLENGSYKAGMWVRDSSAGIGTLTFYDPENGTFGGLGHPVCDADTKEPLPLSAGTVG
EINLTGFNKSRSGCPGQLLGEFANSASTGDILKNCESGVFGTLNANPCPNAKEFPLGFRQ
EIHPGKAKILSSIDNDGPKEYEISIEQINLSDSAEHDLVIKITDKTLLEKTGGILQGMSG
SPIIQDGRLVGAVTHVFIEDTAKGYGIFADEMYSKTSELAESTIENAG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcatttttcaaaaaaacagcctgcgtcacagggataatactgctggggctgttt
ggtcttataggattttattccacaacgctccccgatttctaccttgtttcaaagggcagc
gagcttagcgtgaactcctttttcaccatatcctcaaagccctgcgaaagcaaggtgaca
gtggcggtgtcaggcggttcgtcaggagcatcacgatacacaaaaaatatgctcatgctt
tttggggcagtgccagtcaaggaggttgaatcaaagacaatggaaagaccaatgctttat
ccttgcggacagccattcggcataaagcttctcacagagggcgtaatggtagtcgatctg
caaaaggtggattcttcaagccctgccaaagattgcggtataagagagggcgatgttata
gtatctatcgacggagaaaaagtcaaaagcaacgcagacgttgcaaagataatcagaagc
tcaaacggtgaagcctgctcagtgcgcataaagcgtggaagcaacgacctgaccttcaag
ctctgcccacgccttgagaacggaagctacaaagcaggaatgtgggtgcgtgactcctcc
gcaggcataggcactctcacattctatgaccctgaaaacggaactttcggaggccttggt
caccccgtatgtgacgcagacacaaaagaacccctccccctctccgcaggcacagttggc
gaaataaacctcacaggcttcaacaagtcacgctcaggctgtccgggacagcttttaggc
gagtttgcaaactccgcctccacaggtgatatcctgaaaaactgcgaaagcggcgtgttc
ggcacactgaatgcaaacccttgcccaaatgcaaaagagtttcctctcggcttccgtcag
gaaatacaccccggcaaagccaaaatactctcctctattgacaatgacggaccaaaagag
tacgaaatttctatcgagcaaataaatctctcagattctgccgagcatgaccttgttatc
aaaataactgacaagacgcttcttgaaaaaacagggggcattttgcagggcatgagcggc
tcgcctatcattcaggacggaagactcgtgggcgcagtgacccatgtttttatcgaggac
accgccaaaggctacggtatcttcgctgacgaaatgtattcaaagacctcagagcttgcc
gaaagcaccatagaaaacgcaggttag
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