Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_I01387
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Entry
RBI_I01387 CDS
T03158
Symbol
citB
Name
(GenBank) aconitate hydratase
KO
K01681
aconitate hydratase [EC:
4.2.1.3
]
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Pathway
rus00020
Citrate cycle (TCA cycle)
rus00630
Glyoxylate and dicarboxylate metabolism
rus01100
Metabolic pathways
rus01110
Biosynthesis of secondary metabolites
rus01120
Microbial metabolism in diverse environments
rus01200
Carbon metabolism
rus01210
2-Oxocarboxylic acid metabolism
rus01230
Biosynthesis of amino acids
Module
rus_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RBI_I01387 (citB)
00630 Glyoxylate and dicarboxylate metabolism
RBI_I01387 (citB)
Enzymes [BR:
rus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
RBI_I01387 (citB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
AcnX
DUF1743
Motif
Other DBs
NCBI-ProteinID:
CCO05099
UniProt:
W0U6D0
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All DBs
Position
I:complement(1545574..1547514)
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AA seq
646 aa
AA seq
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MGLTLTEKILKAHLVDGEFVKGQEIGIRIDQTLTQDATGTMAYLEYEAMGVPRVRTEKSV
AYIDHNTLQSGFENADDHRFIGSVCKKHGIYFSRPGNGICHQVHLERFGIPGKTLIGSDS
HTPTGGGIGMIAIGAGGLDVAVAMGGGAYYITYPKIVKVNLTGKLSPWVSAKDVILEVLR
RMSVKGGVGKVIEYCGEGVKTLTVPERATITNMGAELGATTSIFPSDETTLAFLKAQDRA
DVWSELKADDDAVYDEQIDIDLSQLVPLAACPHSPDNVKSVNEIGKLKIDQVCIGSCTNS
SYVDMMKVAHILKGKTVDPSVSLAIAPGSKQVLNMIAENGALADMIAAGARILESACGPC
IGMGQSPNSKGVSLRTFNRNFEGRSGTKDGQIYLVSPEMAAVSALTGYLTDPRTLGDMPE
FKLPEHFKINDNMVVPPADEADMDSVEVLRGPNIKPFPQTSPLDDSIDCQVSLKVGDNIT
TDHIMPAGAKILPLRSNIPAISQHCFTVCDEDFPRRAKNMGKSIIVGGSNYGQGSSREHA
ALAPLYLGIKAVLVKSFARIHRANLINAGILPLTFVNEADYDKINQGDEIVLADVRADVE
ADMSKLIVVNKTTGVEIPVLCELTGRTKDIILAGGLLDYTREQLSK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgggacttactttaacagaaaaaatacttaaagcacatcttgttgacggcgaatttgtt
aagggtcaggagatcggtatccgtatcgaccagacacttactcaggacgcaacaggtaca
atggcttatcttgaatatgaggcaatgggcgttcctcgtgtcagaacggaaaagtctgta
gcttatatcgaccacaacacgcttcagtcaggctttgagaatgccgacgaccacagattt
atcggttctgtctgcaagaagcacggcatttatttttcacgtcccggaaacggtatctgt
catcaggtacatcttgagcgtttcggtataccaggtaagacccttataggctctgacagc
cacactccaacaggcggtggtatcggaatgatcgctataggtgcaggtggacttgatgtt
gcagttgcaatgggtggtggtgcttattacatcacatatcctaagatagtaaaggtaaat
ctcacaggcaagctttctccatgggtatcagctaaggacgttatccttgaagttctcaga
agaatgtctgtaaagggcggcgtaggcaaagttatagaatactgcggtgagggcgtaaag
acacttacagtccctgagagagcaactatcacaaatatgggtgctgagcttggtgcaacc
acatctatcttcccttctgacgaaacaacacttgcatttctgaaggctcaggacagagct
gacgtatggagcgagctaaaggctgatgatgacgctgtctatgacgaacagatagacatc
gatctttcacagctcgtaccactggctgcctgtcctcattctcctgacaacgttaagagc
gtaaatgagatcggaaagcttaagatagatcaggtttgtatcggctcatgcacaaactct
tcttatgttgacatgatgaaagtagctcacattcttaagggcaagacagttgaccctagc
gtttcacttgcaatcgctccaggctcaaagcaggtacttaacatgatcgctgagaacggc
gcacttgctgatatgatagcagcaggcgcaagaatacttgaatccgcttgcggcccatgt
atcggtatgggtcagtcacctaactcaaagggtgtttcacttagaacattcaacagaaac
tttgagggacgttcaggcacaaaggatggtcagatctatctggtatcacctgaaatggct
gctgtttcagctctcacaggctacctcacagacccaagaacacttggagatatgcctgag
ttcaagcttcctgaacatttcaagataaacgacaatatggttgttccgccagctgacgag
gctgatatggacagcgttgaggttcttagaggaccaaatatcaagcctttcccacagact
tcaccgcttgatgacagcattgattgtcaggtatcacttaaggtgggcgacaacatcaca
accgaccacatcatgcctgccggtgcgaagatacttccattgcgttcaaatatccctgct
atatcacagcattgctttacagtatgtgatgaggacttcccaagacgtgcaaagaacatg
ggcaagtcaataatcgttggcggctcaaactatggtcagggttcatcaagagaacacgca
gcacttgctcctctctatcttggcataaaggctgttcttgttaagagctttgcaagaata
cacagagctaatcttatcaacgcaggtatccttccgctcacatttgtaaatgaagctgac
tatgacaagataaatcagggcgatgagatcgttcttgctgacgttcgtgcagatgttgag
gctgatatgtctaagctcattgttgtgaataagacaacaggtgttgagataccagttctc
tgcgagcttacaggcagaacaaaggatattatccttgcaggtggtctgcttgactacaca
agagaacagctctcaaaataa
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