KEGG   Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00577
Entry
RBI_II00577       CDS       T03158                                 
Name
(GenBank) Site-specific DNA recombinase
  KO
K04763  integrase/recombinase XerD
Organism
rus  Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:rus00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rus03036]
    RBI_II00577
Chromosome and associated proteins [BR:rus03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    RBI_II00577
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 DUF3435
Other DBs
NCBI-ProteinID: CCO06331
UniProt: W0U929
LinkDB
Position
II:complement(644378..645286)
AA seq 302 aa
MFEYRPFVDQFLDYCRYHKKLSEKTVRAYKIDLSQYALFSDTLSKQALWDYIECLNKKYK
PKTVKRKLATLKAFIHFLLLQDYIDFNPFDKLETSIREPVLLPKTIPLDVIAKIISFSYQ
QIGSAQSAYQMKCAVRNAAVIELLFATGARIAEICTLKPENVDLLGRSVKFYGKGSKERL
IPVENMAVLSILKRYRLLFEDNISVSGYFFVNKLGRRMTEQSVRNMLSSYCNQCGVEMHI
TPHMFRHSFATLLLEEDVDIRYIQRMLGHSSITTTQIYTHVTSSKQKEILKTKHPRNKMD
FQ
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtttgaatatagaccttttgtagaccaatttctcgattactgccgttaccataaaaag
cttagcgaaaaaactgtgcgtgcatacaaaatcgacctttcgcagtatgcactgttttcc
gatacgctttcaaaacaagcattgtgggattatatcgagtgcctgaataaaaagtacaag
ccgaaaaccgtaaagcgtaagcttgctacgctaaaagcttttatccattttctcctgttg
caagactacatagattttaacccattcgataagcttgaaacttcgatcagagagcctgtg
ctgctgcccaaaacgatacctctcgacgtgatcgctaagataatttccttttcttatcag
cagataggttcagcccaaagtgcctaccaaatgaaatgtgccgtcagaaatgccgctgta
attgaattgctttttgctacaggtgcaaggatagctgagatatgtactcttaaaccggaa
aatgttgatcttttaggacgatccgttaagttttacggcaaaggttcaaaagaacgcctt
atacccgtggaaaatatggctgttctcagcatacttaaaaggtacagacttctttttgaa
gataatatctccgtgtcagggtacttcttcgtcaataagctcggcagaagaatgacagag
caatcggtacgaaatatgctgagttcatattgcaatcaatgcggtgttgaaatgcacata
acgccacatatgttccgtcactcgtttgcgactctgcttttggaagaggacgtggacatt
cgttacatacaaagaatgttgggccacagctcgataaccacgactcagatctacacgcac
gtcacatcatcaaagcaaaaggagatcttaaagactaagcacccaagaaacaaaatggac
tttcagtga

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