Ruminococcus bicirculans (ex Wegman et al. 2014): RBI_II00577
Help
Entry
RBI_II00577 CDS
T03158
Name
(GenBank) Site-specific DNA recombinase
KO
K04763
integrase/recombinase XerD
Organism
rus
Ruminococcus bicirculans (ex Wegman et al. 2014)
Brite
KEGG Orthology (KO) [BR:
rus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rus03036
]
RBI_II00577
Chromosome and associated proteins [BR:
rus03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
RBI_II00577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
CCO06331
UniProt:
W0U929
LinkDB
All DBs
Position
II:complement(644378..645286)
Genome browser
AA seq
302 aa
AA seq
DB search
MFEYRPFVDQFLDYCRYHKKLSEKTVRAYKIDLSQYALFSDTLSKQALWDYIECLNKKYK
PKTVKRKLATLKAFIHFLLLQDYIDFNPFDKLETSIREPVLLPKTIPLDVIAKIISFSYQ
QIGSAQSAYQMKCAVRNAAVIELLFATGARIAEICTLKPENVDLLGRSVKFYGKGSKERL
IPVENMAVLSILKRYRLLFEDNISVSGYFFVNKLGRRMTEQSVRNMLSSYCNQCGVEMHI
TPHMFRHSFATLLLEEDVDIRYIQRMLGHSSITTTQIYTHVTSSKQKEILKTKHPRNKMD
FQ
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatatagaccttttgtagaccaatttctcgattactgccgttaccataaaaag
cttagcgaaaaaactgtgcgtgcatacaaaatcgacctttcgcagtatgcactgttttcc
gatacgctttcaaaacaagcattgtgggattatatcgagtgcctgaataaaaagtacaag
ccgaaaaccgtaaagcgtaagcttgctacgctaaaagcttttatccattttctcctgttg
caagactacatagattttaacccattcgataagcttgaaacttcgatcagagagcctgtg
ctgctgcccaaaacgatacctctcgacgtgatcgctaagataatttccttttcttatcag
cagataggttcagcccaaagtgcctaccaaatgaaatgtgccgtcagaaatgccgctgta
attgaattgctttttgctacaggtgcaaggatagctgagatatgtactcttaaaccggaa
aatgttgatcttttaggacgatccgttaagttttacggcaaaggttcaaaagaacgcctt
atacccgtggaaaatatggctgttctcagcatacttaaaaggtacagacttctttttgaa
gataatatctccgtgtcagggtacttcttcgtcaataagctcggcagaagaatgacagag
caatcggtacgaaatatgctgagttcatattgcaatcaatgcggtgttgaaatgcacata
acgccacatatgttccgtcactcgtttgcgactctgcttttggaagaggacgtggacatt
cgttacatacaaagaatgttgggccacagctcgataaccacgactcagatctacacgcac
gtcacatcatcaaagcaaaaggagatcttaaagactaagcacccaagaaacaaaatggac
tttcagtga
DBGET
integrated database retrieval system