KEGG   Ruegeria sp. THAF33: FIU92_08185
Entry
FIU92_08185       CDS       T06269                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rut  Ruegeria sp. THAF33
Pathway
rut00230  Purine metabolism
rut00240  Pyrimidine metabolism
rut01100  Metabolic pathways
rut01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:rut00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    FIU92_08185 (nrdJ)
   00240 Pyrimidine metabolism
    FIU92_08185 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rut03400]
    FIU92_08185 (nrdJ)
Enzymes [BR:rut01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     FIU92_08185 (nrdJ)
DNA repair and recombination proteins [BR:rut03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    FIU92_08185 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N
Other DBs
NCBI-ProteinID: QFT73002
LinkDB
Position
complement(1611021..1614641)
AA seq 1206 aa
MKIERKFTKPDQDAYAELNFVSATSEIRNPDGTIVFRLDDIEVPSSWSQVASDVIAQKYF
RKAGVPTKLKKVKEKDVPEFLWRSVPAEGAEFEGETSSKQVFDRLAGAWAYWGWKGGYFS
TEEDARAYFDEMRYMLATQRAAPNSPQWFNTGLHWAYGIDGPAQGHHYVDYKTGKLTKSK
SAYEHPQPHACFIQSVDDDLVNEGGIMDLWVREARLFKYGSGTGTNFSHLRAEGEALSGG
GKSSGLMGFLKIGDRAAGAIKSGGTTRRAAKMVIVDADHPDIEQFIEWKVIEEQKVASIV
AGSKMHEKMLNGIFEAIRSWDGSADDAYDPNKNDALKKAVREAKKVAIPETYIKRVLDYA
KQGHDSIEFPTYDTDWDSEAYSSVSGQNSNNSIRVTNAFLKAVEKDADWELINRTDGKVA
KVVKARDLWEKVGHAAWACADPGIQFHDTVNEWHTCPEDGEIRGSNPCSEYMFLDDTACN
LASMNLLTFLKDGEFQAADYMHASRLWTLTLEISVTMAQFPSKEIAQLSYDFRTLGLGYA
NIGGLLMNMGYSYDSDEGRAICGALTAIMTGVAYATSAEIAGELGPFKGYERNAEHMLRV
IRNHRRAAQGVTEGYEKLAVKPVPLDHGNCPDKRLVDLAMSAWDEALSLGEKNGYRNAQA
TVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRSVPSALEKLGYSSSQIE
EIVSYAVGHGTIGNAPGINHTSLTGHGFGPNELAKVDAALESAFDIRFVFNQWTLGEDFC
TGVLGIPATKLNDPTFDLLRHLGFSRADIEAANDHVCGTMTLEGAPHLKEEHYSIFDCAN
PCGKKGKRFLGVESHITMMAAAQSFISGAISKTINMPNDATIEDCQKAYELSWSLGVKAN
ALYRDGSKLSQPLAAALVEDDDEAAEVLESGSAQEKAVVLAEKVIEKVVVKEIIRSHREK
LPHRRKGYTQKAIVGGHKVYLRTGEFEDGQLGEIFIDMHKEGAGFRAMMNNFAIAVSVGL
QYGVPLEEFVDAFTFTKFEPAGMVQGNDSIKNATSILDYIFRELAVSYLDRTDLAHVKPE
GATFDDLGRGEDEGVSNVSEISDTAASKSLEVLKQISSTGYLRKRLPQDLAVFNAGQVEV
NGMAEPAASFEASAAETAVATSMDARTKAKMQGYEGDPCGECGNYTLVRNGTCMKCNTCG
ATSGCS
NT seq 3621 nt   +upstreamnt  +downstreamnt
atgaagattgaaagaaaattcaccaaaccggatcaggacgcctatgcggaactgaatttt
gtgtcggcaacatctgaaatccgaaatccggacggtacaattgtctttcgtcttgatgac
atcgaagtcccttccagctggtcgcaggttgcaagtgatgtgattgcgcagaagtacttc
cgcaaggccggggtgcccaccaagctcaagaaggtgaaagaaaaggatgttcctgaattt
ctgtggcgatcggttcccgcggaaggcgcagagttcgaaggagaaacatcgtcgaagcaa
gtgttcgaccgtctggctggcgcctgggcctattggggctggaagggcggctatttctcg
accgaggaagacgcgcgcgcctatttcgacgagatgcgctatatgctggcgacccagcgt
gcggcgccaaactcaccgcagtggttcaacaccggccttcactgggcttatggaatcgat
ggcccggcgcaggggcaccactatgtcgattacaagaccggcaagctgaccaagtcgaaa
tcggcctatgaacatcctcagccgcacgcgtgcttcatccagtcggtcgatgatgatctg
gtgaacgaaggtggcatcatggacctgtgggtgcgcgaggcgcgcctgttcaaatacggg
agcggcacaggcaccaacttcagccatctacgtgcagaaggcgaggcgctttcgggcggc
ggcaaatcctcgggcctcatgggctttctcaagatcggcgaccgcgccgctggcgcgatc
aaatcaggcggaacaacccgtcgggcagcaaagatggtgatcgtcgatgcagatcaccca
gacatcgagcaattcatcgaatggaaggtgatcgaagaacagaaggtggcctcgatcgtt
gccggatcgaagatgcacgagaaaatgctgaacggcattttcgaggccatccggtcttgg
gatggatctgccgatgacgcctatgatccgaacaagaacgacgcgctgaaaaaggcggtt
cgtgaagcgaaaaaggtcgcaataccagaaacttacatcaagcgtgttttggactatgct
aagcagggccacgacagcatcgagttcccgacctatgatacagactgggattcggaggcg
tacagctcggtttcgggccagaactcgaacaattccatccgcgtgaccaatgcgttcctc
aaggcggttgaaaaggatgccgattgggagctgatcaaccgcaccgacggcaaggtggcc
aaggtggtcaaggcgcgggatttgtgggaaaaggtcggccatgcggcctgggcctgtgcc
gatccgggcatccagttccatgacacggtcaacgagtggcacacatgccccgaagatggt
gagattcgcggttcgaacccgtgctcggaatacatgttcctggatgacacggcctgtaac
ctggcctcgatgaacctgctgaccttcctcaaggatggtgagttccaggcagcggattac
atgcatgcctcgcgcctgtggaccctgacgctggaaatctcggtgaccatggcgcagttc
ccgtcgaaggaaatcgcgcagctgtcttatgacttccgcacactgggtctgggttatgcc
aatatcggcggtctgctgatgaacatgggctacagctatgactcggacgaaggccgggcg
atctgtggcgcgctgaccgcgatcatgaccggtgtggcttatgcgacatcggctgaaatt
gccggagagcttggcccgttcaaaggttatgagcgcaacgccgagcatatgctgcgtgtc
atccgcaaccaccgccgcgcggcgcagggtgtgacagaaggctacgagaaactggccgtc
aaaccggtgccgctggatcacggcaactgcccggacaagcgcctggtcgatctggccatg
tccgcctgggatgaggcgctgagcctgggtgagaagaacggttatcgcaacgcgcaggcc
accgtgatcgcgcccaccggcaccatcggtctggtgatggattgcgacaccaccgggatc
gagcctgactttgcgttggtgaagttcaagaagctggccggtggcgggtatttcaagatc
atcaaccgctcggtgccttcggcgctggaaaagctgggctattcctcgtcgcagatcgaa
gagatcgtatcctatgcggtcggtcacggcaccatcggcaatgcgccagggatcaaccac
acctcgctgaccggacatggctttggcccgaacgaactggccaaggtggatgcggctctg
gaaagcgcgttcgatatccggttcgtcttcaaccagtggacactgggcgaggatttctgc
accggtgttctgggcattccggcgactaagctgaatgacccgacattcgacctgctgcgt
catcttggtttttcccgtgcggatatcgaggcggccaacgaccatgtctgcggaaccatg
acgctggaaggtgcgccgcatctgaaagaagagcattattcgatctttgattgcgccaac
ccgtgcggaaaaaaaggcaagcgtttccttggagttgaaagccatatcaccatgatggcg
gcggcgcagagcttcatttcgggtgcgatctcgaagacgatcaacatgccgaatgacgcg
accatcgaagactgtcagaaagcctatgaactcagctggtcgctgggtgtgaaggccaac
gcgctctatcgtgacggctcgaaactgtcgcagccgctggcagctgcactggtcgaggat
gacgacgaggcggcggaagtgctggaaagcggctcggcgcaggaaaaggccgtcgttctg
gccgagaaggtgatcgagaaggttgtggtcaaggaaatcatccgcagccatcgtgaaaaa
ctgccgcatcgccgcaagggctatacccagaaggcaatcgttggtggccacaaggtctat
ctgcgcaccggtgagttcgaagacggccagttgggcgagattttcatcgacatgcacaag
gaaggcgccggcttccgtgcgatgatgaacaactttgccatcgccgtgtcggttggtctg
caatacggcgtgccgctggaagaattcgtggacgccttcaccttcaccaagttcgaaccc
gcggggatggtgcagggcaacgactcgatcaagaacgcaacgtcaatcctggattacatc
ttccgcgaactggccgtgtcctatctggaccgcaccgatttggcccacgtgaaacccgaa
ggcgcaacctttgacgatttgggtcggggcgaggacgagggtgtctcgaatgtttcggaa
atcagcgatacagccgcgtccaagtcgttggaagtgctgaaacaaatcagctccaccggc
tatctgcgcaagcgcttgccgcaagatctggctgtgttcaatgcgggtcaggtcgaggtg
aacggcatggctgaaccggcggcttcctttgaagcatcggcagccgaaacggcggtggcc
acaagcatggacgcccgcacaaaggccaagatgcaggggtacgagggcgatccctgcggc
gaatgcggaaactacacactggtgcgcaacggcacctgcatgaaatgcaacacctgtggc
gcgacaagcgggtgtagctaa

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