Candidatus Rickettsiella viridis: RVIR1_06610
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Entry
RVIR1_06610 CDS
T05765
Symbol
addA
Name
(GenBank) UvrD/REP helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rvi
Candidatus Rickettsiella viridis
Brite
KEGG Orthology (KO) [BR:
rvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvi03400
]
RVIR1_06610 (addA)
Enzymes [BR:
rvi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RVIR1_06610 (addA)
DNA repair and recombination proteins [BR:
rvi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RVIR1_06610 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PDDEXK_1
DEAD
Motif
Other DBs
NCBI-ProteinID:
BBB15159
UniProt:
A0A2Z5UUD9
LinkDB
All DBs
Position
complement(693473..696847)
Genome browser
AA seq
1124 aa
AA seq
DB search
MKNLIEHDAEARLQALDPQQSFIVQAPAGSGKTELLVRRYLILLSRVRFPEAIIAITFTR
KAAHEMRMRILDALEKAEQPCPTSTKEAARWQLARNVIAHDKIMNWNLLANPNRLRIQTI
DSFCQRLTCQMPLLSKLDAQLSPVDKPEFLYRLAAQELISNLEINSPWQNSLLKLIKHGD
NDFSSLEASLSELLASREQWLSYFTQDPTHLRESLEKTLQKINQTLIAQLNSLISSDLRQ
ELTELLNFSLQQRVEKPLEKIANRYYWQQACFLLLKDDNEWRNEVTKKQGFPAASGEKDK
QKKAYYTAIKQRVESLIEQLKNQADLHEALIAFRRAPPLHYTDAQWEIITALFDVLPLLV
AHLQVVFQQAKKVDHTEILLCALAALGDEENPSDLAFSLDYQIEHLLIDEFQDTSLTQFQ
LIEKLIAGWQANEEKTLFLVGDPMQSIYRFRKAEVGLFLQAKQDGIGNIPLQSLTLAVNF
RSDPAIISWINACFSQLLPKKENINQGAITFAPAIAFQTQNTEKAVGMYWMNEEDSLREA
NKIIAIIQEIRQKNPHDSIAILVRARTHLKDLLPALQAARLSYHAVEIESLGQHSAVQDM
VALTRALLHLGDRISWLALLRSPFCGLDLRDLHSITHFSADTSSYHTIWQQLKDFEKMDL
REESKQRCRRIVPILQHCFAEQDNFTLTSWIKNAWLRLGGATTLNHPEEITHIQSYLDHL
EKKVLAEADEFDTFKLEKELADIVIENNKTLSNPIAVMTIHKAKGLEYDHIILPCLHRKS
SSDNAKLMLYQERHVTKTKKDCLLAPIKAKSEKEDLIYNYLSRTEKQKTRYELARLLYVA
STRAKKSLSLLGVVKEDSKEELKVPTDTLLHSLWQATIIHRDDFFSLDTDAVATNELSAS
RRVKRLVADWQNPIFTPKIAAKVAHKPFSYQWQPNLAKATGTVIHRLLYQISQDGLEYWD
KIDFTQENTRFIRLLEQAGIIPSQLDEALSKLTQALKKIIQDPRGRWILSQQHQAAHSEF
ALNVAQNNHLRQLIMDRTFVEAGVRWIIDYKTTAYTGDNPEIFLNTAMQQHKKQLEGYAA
AFTQMSALKENYKIRLGLYFPLDTLWQAWEYLPSSNTIAVMASE
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctaattgagcacgatgcagaagcacggttacaagcgcttgatccacagcaa
tcatttattgtacaagcgccggccggatcagggaaaactgaattattagtacgtcgttat
ttaatattactcagccgtgtgcgttttcccgaagcgattattgccattacgtttacgcgt
aaagcggcacatgaaatgcgcatgcgaatactggatgctttagaaaaggcagagcagcct
tgccctacttctacaaaagaggcggcacgttggcaattggctagaaacgtcatcgcgcat
gacaaaatcatgaattggaatctgctagcgaatcccaatcgtttacgcattcaaaccatt
gatagcttttgccaacgcttaacgtgtcagatgcctttgctgtctaaactcgacgcacaa
ctcagccctgtcgataagcctgaatttctctaccgtttagcggctcaagagctcatttca
aatttagaaataaactctccttggcaaaatagcttattgaaactcatcaaacatggtgac
aatgatttttcttccctagaagcatcattaagtgaattattagccagtcgtgaacaatgg
ctaagctattttactcaagatcctacgcacttacgcgaatccttagaaaaaaccttacaa
aaaattaatcaaacacttatcgctcaacttaattcacttatttctagcgatttacgacaa
gaactcactgagttattaaatttttctctacagcaacgtgtagaaaagccattagaaaaa
atagctaaccgttactattggcaacaagcatgctttttattgttaaaggatgataatgaa
tggcgtaacgaagtaacaaaaaaacaaggcttccctgccgcatctggcgaaaaagacaag
caaaagaaagcatattatactgcgataaaacaaagagtagagagcctcatcgaacaatta
aaaaaccaagcggacctacatgaagctttaattgcgtttagacgcgcaccgccgttgcac
tacaccgatgcacaatgggaaataatcaccgccttatttgatgtattacccctattagtc
gcgcatttacaggtagtttttcagcaggctaaaaaagtcgatcataccgaaattctactg
tgcgcattagccgctttaggtgatgaagaaaatcccagcgatttagcatttagcctggat
tatcaaattgaacatctgttaatcgatgaatttcaagatacctcgctcacacaatttcag
ctaattgaaaaactcattgccggctggcaagcgaatgaagaaaaaacactttttctggtc
ggcgatccgatgcaatcgatttatcgtttccgtaaagcggaagtgggtctatttttacaa
gcaaaacaagacggtattggcaatataccattgcaaagcttaacactcgctgtcaatttc
cgatccgatcccgctattatcagctggattaacgcttgttttagccaactattacccaaa
aaagaaaatattaatcaaggtgctattacatttgcaccagcgattgcttttcaaacacaa
aatactgaaaaagccgttggcatgtattggatgaatgaagaggattcgctacgcgaggca
aataaaatcattgctatcattcaagaaatccgccaaaaaaatccacacgattctattgct
attttagtgagagcgcgtacgcatctaaaagatttattacctgccctacaagccgccaga
ctttcttatcacgcggtagaaattgaaagcctgggtcaacattctgctgtacaagatatg
gtggcattaacacgcgctttattacatctaggcgatagaatcagctggttagcgctatta
cgttcgcctttttgtggtttagatttaagggatctgcatagcattacgcatttctctgca
gatacatcgtcctaccacacgatttggcaacaacttaaggattttgaaaaaatggattta
cgtgaagaaagcaaacaacgttgccgtcgtattgtgcctattttacaacactgttttgct
gaacaagataacttcacgctaacaagctggattaaaaatgcctggctccgcttaggagga
gccaccacactcaatcatcctgaagaaatcacgcatattcaaagctatttagatcaccta
gaaaaaaaagtgttagccgaagctgatgaattcgatacttttaaattagaaaaagaactc
gctgacatagttatagaaaataataaaacactttctaaccctattgccgttatgaccata
cataaagccaaaggcctagagtatgatcatattattttgccctgcctacatcgtaaaagc
agcagcgataatgcaaaattaatgttatatcaagaacgtcatgttactaaaacaaaaaaa
gattgcttattagcgcccataaaagcaaaaagtgaaaaagaagaccttatttataactat
ctttctcgcacagaaaagcaaaaaacccgctacgaattagcacgtttactttatgtcgcc
agtacacgtgcaaaaaaatccttatcattgctcggcgtagtgaaagaagactcaaaagaa
gaactaaaggtgcccactgatactttactgcactctttatggcaggcaacgataattcat
cgcgatgattttttttccttagatactgatgccgtagcaacaaatgaattatctgcttca
cgtcgagtcaaacgattagttgctgattggcagaaccctatttttacccccaaaatagcc
gctaaggttgcacacaaacccttttcttaccaatggcaacctaatttagcgaaagcaacc
ggtacagttattcatcgtcttttatatcaaatcagccaagacggtttagaatactgggat
aaaatagattttacccaagaaaatacccgttttatacgactattagaacaagccggcatc
attccatcacaattagatgaagccttaagcaaattaacacaagcattaaaaaagataatc
caggatccacgcggacggtggattttaagtcagcaacaccaagctgcgcattcagaattc
gctttaaatgttgcacaaaacaaccatctgcgacagcttattatggatcgcacctttgtt
gaggccggcgtacgctggatcattgattataaaacaaccgcctataccggcgataaccct
gagatttttttaaataccgcgatgcaacaacataaaaaacagctcgaaggctatgcagcg
gcttttacacagatgtccgcgttgaaagaaaattataaaattcgattaggcctctatttt
ccacttgatacgctatggcaggcgtgggagtatctaccttcttccaacacaatcgccgtc
atggcgagcgaatga
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