Rhododendron vialii: 131334555
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Entry
131334555 CDS
T09330
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
rvl
Rhododendron vialii
Pathway
rvl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
131334555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rvl03400
]
131334555
DNA repair and recombination proteins [BR:
rvl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
131334555
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
VHS
SBD_N
Motif
Other DBs
NCBI-GeneID:
131334555
NCBI-ProteinID:
XP_058225614
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Position
7a:514746..518605
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AA seq
646 aa
AA seq
DB search
MEEEREKVVVAGLIEKATNSTAGEVDPRLLKAIKSVVRRSDSELRLAAEALMNLMKRDHS
QVRYLALLIIDELFMRSKLFRTLLVENMDQLLALSVGFRRNLPLPAPPAVASVLRSKAIE
FLEKWNASYGIYYRQLRLGFDYLKNTLRFQFPNLQANAARIHQERREREMRTKAILQNKF
ETLKENFSSIKDELQSTTDEIGECLDIVTAKNETMLDLIVDDEETEEFRSSELRQIRLDS
LKEGDKVEETNDNKVVFDALRELYKLLVTKHLVSVQEWISVLTRVEVADNRFRDSMLKEL
IDTRNNLKSVKNKCEESGCSLPNISNREEEEEDIWEEGTLESFENRNSILNNQCDDSAIT
STSIGVEKKAPKSSNKETDDNKKLDCEGSGPDSFPLRNKLLAKAPLMNWGTFLDTWGSNR
DVLANQRGLELEGHWGRVDYDAVIPAEKIAELNVQATLYKEDPIEIQPCRAPLSKGGLCQ
RKDLRVCPFHGPVIPRDNDGKPIEQTTLIEEEKTPELGTDLVERLAEQAVKNVRVRDKED
AKKREQDKQALKRAKLAKVRQHNEAVLRDAAMASTSRSSAIGEITNGERSSARNKKQTLA
AMLKKKVTSKDRLAQRLLNSRATDSTVRQLTQGEDSKYREAFPNQW
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagagagagaaagtggtagtggcagggttgatagagaaggcaaccaactcc
acggcgggggaggtggacccacgcctcctcaaagccatcaaatccgttgtccgtcgctct
gattctgagctccgcctcgccgccgaagcccttatgaacctcatgaagcgagaccactcc
caggtaagataccttgctcttctcataatagatgaacttttcatgcggtcaaaacttttc
agaacccttcttgttgagaacatggatcagttattggctctaagtgtgggattccgaaga
aacttgccgcttccggctcctccagctgttgcatctgttttgcgttctaaggcaatcgaa
ttcttggagaagtggaatgcttcttatgggatttattacagacagctcaggttagggttt
gactacctgaaaaacacgctgcgttttcaattccctaacctacaagctaatgcagctcgg
attcaccaggagagaagggagagagagatgaggacaaaagcaattttacaaaacaagttc
gaaactctgaaggaaaatttttcgtccatcaaggatgagttacagtcaacaactgatgaa
attggggaatgtttagatattgttactgcaaaaaatgagactatgctggatcttatagtt
gatgatgaagaaacagaagagtttcgtagttctgagcttcggcagatacgtcttgattca
ttgaaagaaggggacaaagttgaagaaacaaatgacaataaagtggtttttgatgcgctg
agggagttgtacaagctcctagttaccaagcatttggtttcagtgcaagagtggatctca
gttcttacaagggttgaagtggcagacaacagattcagggactccatgttgaaagagttg
atcgatactcgaaataatctcaagtcggtgaagaacaaatgcgaagaatcgggctgttct
cttcccaatatcagcaatcgtgaagaagaagaagaagatatttgggaagaaggtactctt
gaatcatttgagaacaggaattctattctcaataaccaatgtgatgattccgccatcacc
tcaacttccattggtgtggaaaagaaagctcccaaaagcagtaataaagagacagatgac
aacaaaaagctggattgtgaaggtagtggacctgactcattccctttaaggaataagctt
ctggctaaagctccacttatgaattggggtacgttcttggatacttggggttccaatagg
gatgttttggcgaaccaaaggggtttggagcttgaaggccactggggtcgagtagactat
gatgcagttattccggcggagaaaatcgcagagttgaacgttcaagcaactctttacaaa
gaagaccctattgaaatccaaccatgtcgcgctcctttgagtaaagggggattatgtcag
agaaaagacttgagagtttgcccatttcatggtcctgttataccgcgggacaacgatggg
aaaccaatagagcaaaccactttaatagaagaggagaaaactccggaattggggactgat
ttggtggagcgattagcagaacaggcggtgaagaatgttagggttagggataaagaagac
gcgaagaagagagaacaggataaacaagctttgaagcgagcaaagcttgcaaaagttcga
caacacaatgaagctgtcttacgtgatgctgctatggcttcaacttcaagatcttcagct
attggtgagataaccaatggagagaggtcttcagccagaaacaagaagcaaactctagca
gcaatgctgaaaaagaaagtgacttctaaagatagattagcccagaggttattgaactcc
cgggccacagattctacagtaagacagcttacccagggagaggattcaaaatacagagaa
gccttcccaaatcagtggtag
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