Rubrobacter xylanophilus: Rxyl_1397
Help
Entry
Rxyl_1397 CDS
T00368
Name
(GenBank) RNA polymerase, sigma 28 subunit
KO
K02405
RNA polymerase sigma factor FliA
Organism
rxy
Rubrobacter xylanophilus
Pathway
rxy02020
Two-component system
rxy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rxy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rxyl_1397
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rxyl_1397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rxy03021
]
Rxyl_1397
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rxy02035
]
Rxyl_1397
Transcription machinery [BR:
rxy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rxyl_1397
Bacterial motility proteins [BR:
rxy02035
]
Flagellar system
Flagellar assembly proteins
Stator
Rxyl_1397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
GerE
HTH_38
AAA_13
HTH_23
HTH_37
DUF6456
HTH_24
MarR_2
Phage_antitermQ
Sigma70_ECF
DUF4164
Motif
Other DBs
NCBI-ProteinID:
ABG04359
UniProt:
Q1AW69
LinkDB
All DBs
Position
1420214..1421008
Genome browser
AA seq
264 aa
AA seq
DB search
MSGPTLGRLWELYGRARAEAAGLRAAGRGGPGLRRAERRVGQLRDRLVVNYSPLVKYVAG
RMAARIPGGVEQEDLVSWGVVGLLKAVETFDPARGAKFETYAISKIRWAILDELRKADPL
PRRVRRRVRETQRAASALTQTLRRAPTEAEIAREVGVGLAEHRETLERYHRARTWSLEEL
LSGMGEGGRELSVSDPTAETAELRERLAEALESLSERERVVITFYYYQGLTLREIGRALN
LTEGRISQILRRALQRLRDRLSGV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgggcccacgctcggccggctctgggagctctacggccgggcgcgggcggaggcg
gccgggctgcgggccgccgggcgcggggggccggggctgcggcgggccgagcgccgggtg
ggccagctgcgcgaccggctcgtggtcaactactccccgctcgtaaagtacgtggccggc
aggatggcggcccgcatccccggcggggtggagcaggaggatctcgtctcgtggggggtg
gtggggctcctcaaggccgtggagaccttcgaccccgcgcggggggccaagttcgagacc
tacgccatctccaagatccggtgggccatcctggacgagctcagaaaggccgacccgctc
ccccggcgcgtgcggcgccgggtccgggagacccagcgcgccgccagcgccctcacccag
acgctgcggcgggcgcccaccgaggccgagatagcgcgcgaggtgggggtggggctcgcc
gagcaccgggagacgctcgagcgctaccaccgcgcccgcacgtggtcgctcgaggagctc
ctctccggcatgggggagggcgggcgcgagctctccgtctcggatcccacagccgagacc
gccgagctgcgcgagcggctcgcggaggccctcgagtccctcagcgagcgggagcgggtc
gtaataaccttctactactaccaggggctcacgctgcgcgagatcggtcgcgccctcaac
ctcacggaggggaggatctcccagatcctgcgccgggccctgcagcggctgcgcgaccgg
ctctcaggggtctag
DBGET
integrated database retrieval system
