Rhagoletis zephyria (snowberry fruit fly): 108353934
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Entry
108353934 CDS
T08513
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108353934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rze03021
]
108353934
Enzymes [BR:
rze01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108353934
Transcription machinery [BR:
rze03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
108353934
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
SUFU_C
Motif
Other DBs
NCBI-GeneID:
108353934
NCBI-ProteinID:
XP_017460617
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
VLRMFCFNCHHFLFSRANVEVYIAQLRALNLGLDFVLDDLQEYANELTGINAQFDWNSPE
GQTYLRGRLNDKINSEYSLLKSNKEKLFAAEEETSQASSSSSKPSTSTASQVKSDGVPLV
TLESVEIMNSKNVVEKKQHLFKDFIGGKLVKPGKVCHSCNARKAGMNVINRSLIVLSAAK
AAASVAKFNGNNEDSNDSTEGGNNATGINIEMKGKSYLTPAQAREHLRRLWAHEKDTLVR
IFPFINLDVEEDLVKMSKGSSKNSSSSCPLDVFFWETIIVSPNRFRPLRFLNGRSFEHYR
TSALAELMVVAKSLEYALETAKKNNSGESIARFHGSWQRLQILANRLYDARLDALPDNKA
VGVKQILEKKEGLLRKNMMGKRVNFAARSVISPDPYIMVDEIGVPVVFASRLSYPQPVTQ
WNLHQLQQAVLNGPLVWPGALSVTYEDGYTVRLSPDSVDQRREVAGTLHPPSMKGVQTVN
RHLLSGDVLLLNRQPTLHKPSIMAHKARVLPREKTLRLHYANCKCYNADFDGDEMNAHFP
QSELARAEAYGVASVNYQFLVPKDGSPLSGLIQDHIVAGVMLTVRGRFFNKGDYQQLVYG
ALSFTNRPIRFLPPSILRPAQLWSGKQIISTLVMNLVPEGRPLPSFEIESKIGAKMFISR
PPKEGGGYFMVGDKEMCESVVVFRRGELLQGVMDKVNFGANKNGLIHVCYELYGGDVHTR
LLTSIARLSTNFLQSHHGFTLGIHDILVQAKPNKERRRLIRTAKDLGTKAVADAFNLGST
LAAGEELTEREIEEKLAFAATSRDDFYLKQLDAAYKSHTDTLSNAISGACLPKGLVKPFP
SNNLQMMIQAGAKGGSVNAIQISALLGQIELEGRRIPLMMSGRTLPSFRPYETHPRAGGF
VTGRFLTGIRPQEFFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVVNYDLTVRDS
EGSVVQWMYGEDGLDVIRSQCLKAAFFPTIRANVEALKPRKEELAR
NT seq
3017 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcgaatgttctgcttcaactgccaccactttctcttctcgcgcgccaacgtcgag
gtgtacatcgcccagctgcgggcgctgaacctcggcctcgactttgtcctcgacgacctg
caggagtacgccaacgagctgacgggcatcaacgcccaatttgactggaacagccccgag
gggcagacctacctgcgcgggcggctgaacgacaagatcaacagcgagtactcgctgctc
aagtcgaacaaggagaagctgtttgctgcggaagaggaaacatcgcaagcatcgtcctct
tcttcaaaaccgagcacctcaactgcttctcaggtcaaatctgatggagtgcccctcgtt
accctcgaatcagtggaaatcatgaactcgaagaacgtggtggagaagaagcagcacctc
ttcaaggacttcatcggcgggaagctggtgaagccggggaaggtctgccacagctgcaat
gcccgcaaggcaggcatgaacgtcatcaatcgctcgctgattgtcctcagtgccgccaag
gcggccgcctcggtggccaagttcaacggcaacaacgaggactcaaatgacagcaccgag
ggaggaaacaacgccaccgggatcaacatcgagatgaagggcaagtcctacctaacgccg
gcgcaggcccgggagcacctgcgccgcctctgggcccacgagaaggacaccctggtgcgc
atctttcccttcatcaacctcgacgtggaggaggacctggtgaagatgagcaagggcagc
agcaaaaacagcagcagctcttgtccactggacgtcttcttctgggagacgatcatcgtc
agcccgaaccgcttccggccccttcgcttcctcaacggccgctcctttgagcactaccgc
acctcggccctcgccgagctgatggtcgtcgcgaagagcctcgagtacgcgctggagacg
gcgaagaagaacaacagcggcgagtcgattgcccgcttccacggcagctggcagcggctg
cagattctcgccaaccgcctctacgacgcccgcctcgacgccctgcccgacaacaaggcg
gtgggcgtgaagcagattctggagaagaaggagggcctgctgcggaagaacatgatgggc
aagcgggtcaactttgccgcccgctctgtcatcagccccgacccgtacatcatggtggac
gagattggcgtgccggtggtgtttgccagccgcctcagctacccgcagccggtgacgcag
tggaacctccaccagctgcagcaggcggttctaaatgggcccctggtctggccgggcgcc
ctctcggtcacctacgaggatggctacaccgtccgcctgtcgccggacagcgttgaccaa
cggagggaggtggccggaacacttcatccgcccagcatgaagggcgtgcagacggtgaac
cggcacctcctctccggcgacgtcctccttctcaaccgtcagccgacgctgcacaagccc
tccataatggcgcataaggcgcgagtcctcccacgggagaagaccctccgcctgcactac
gccaactgcaagtgctacaacgccgactttgacggcgacgagatgaacgcccactttccg
cagtcggagctggcgagggcggaggcctatggagtggcctccgtcaactaccaatttctg
gtgcccaaggacggctcgccccttagtgggctcatccaggaccacattgtcgcgggggtg
atgctcaccgtgagggggcgcttcttcaacaagggcgactaccagcagctggtgtacgga
gcgctcagtttcaccaaccggcccattcgcttcctgcccccttccattctccggcccgcc
cagctctggtctgggaagcagatcatcagcacgctggtgatgaacctggtgcccgagggc
cggccgctgccctcctttgagattgagtcgaagattggcgcgaagatgtttatcagtcgg
ccgccgaaggagggaggaggatattttatggttggcgataaggagatgtgcgaaagtgtg
gtcgtctttcggcgaggggagctgctgcagggcgtcatggacaaggtcaattttggggcg
aacaagaatgggctgattcacgtctgctatgagctctacggcggggatgttcatacgagg
ctgctcacctccatcgcccgcctctcgacgaacttcctccagtcgcatcacggctttaca
ctgggcatccacgacattctggtgcaggcgaagccgaacaaggaacgccgccggctgatt
cgcactgccaaggacctgggcacgaaggcggtggccgatgcttttaacctcggctcgacg
ctcgccgctggcgaagagctcaccgagcgggagatcgaggagaagttggcctttgcggcc
acaagccgcgatgacttttacctcaagcagctcgatgccgcctacaagagccacactgac
acgctgagcaatgccatcagcggcgcctgtctcccgaaggggctggtgaagccctttccc
tcgaacaacctgcagatgatgatccaggcgggggcaaagggagggtcggtgaacgccatc
cagatcagcgccctcctcgggcagattgagctggaggggcggcggattccgctgatgatg
agcgggcggacgctgcccagcttccgcccctacgagacacacccccgggcgggcggcttc
gtcacggggcgcttcctgaccggcatccgcccccaggagttcttcttccactgcatggcc
ggccgggaggggctgattgacacggcggtgaagaccagccggtcggggtacctccagcgc
tgtctgatcaagcacctcgagggcctggtggtcaactacgacctgacggtgcgcgattcg
gagggcagtgtggtgcagtggatgtacggcgaggatgggttggatgtgattcgctcgcag
tgtctgaaggcggccttctttcccaccattcgggccaatgtggaggcgttgaagccgagg
aaggaggagctggcacg
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integrated database retrieval system
