Rhagoletis zephyria (snowberry fruit fly): 108360276
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Entry
108360276 CDS
T08513
Name
(RefSeq) protein crooked neck
KO
K12869
crooked neck
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108360276
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rze03041
]
108360276
03036 Chromosome and associated proteins [BR:
rze03036
]
108360276
Spliceosome [BR:
rze03041
]
Complex B
Other components
Prp19-related factors
108360276
Complex C
108360276
Chromosome and associated proteins [BR:
rze03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
108360276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
Mad3_BUB1_I
Utp12
Motif
Other DBs
NCBI-GeneID:
108360276
NCBI-ProteinID:
XP_017467976
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MERPQKMPKVAKVKNKAPAEVQITAEQLLREAKERDLEILPPPPKQKISDPAELADYQQR
KRKVFEDNLRKNRMVVSHWIKYAQWEESQKEIHRARSIWERALDNEHRNITIWLKYAEME
MKNKQVNHARNLWDRAVTIMPRVNQFWYKYTYMEEMLDNVAGARQVFERWMEWQPEEQAW
QTYVNFELRYKEIDRARAIYERFVYVHPDVKNWIKFARFEESHGFVHGARRVYERAVEFF
GDDYIDERLFIAFARFEEGQKEHDRARVIYKYALDHLSKDRTKELYKAYTIHEKKYGDRA
GIEDVIVSKRKFQYEQEVAANPQNYDAWFDYLRLIEGEGDVDVIRETYERAISNVPPANE
KNYWRRYIYLWINYALYEELEAEDLERTRQIYKTCLELIPHKKFTFSKIWLMYAQFEIRC
KELQKARKTLGMAIGMSPRDKLFRGYIELEIQLREFDRCRLLYEKFLEFGPENCVTWMKF
AELENLLGDTDRARAIYELAVQQPRLDMPELLWKAYIDFEVSQTETELARQLYERLLERT
HHVKVWMSYAKFELTQHGAELSDDDPELNIKLSRRVYERANDTLRTSGDKESRVLLLEAW
RDFEREAGDVHTLKKVMEKMPRRVKKRQKIVSESGVEEGWEEIFDYIFPEDEMARPNLKL
LAAAKMWKKQKETVSTEPASSDSGDLVNTTVDE
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaccacagaaaatgcccaaagtggcaaaggtaaaaaacaaagcgcctgccgag
gtacaaatcacggcggagcaattgcttcgagaagccaaagaacgtgatttggaaattctt
ccgccacctcccaaacaaaagatatcagaccccgctgagttagctgattaccaacagcgt
aaacgcaaagtatttgaagacaatcttcgcaaaaatcgcatggtagttagccattggata
aaatatgcgcagtgggaggaatcacaaaaggaaatacaccgagctcgttcaatatgggaa
cgtgccctggataatgagcatcgaaacattaccatttggttaaaatatgctgaaatggaa
atgaagaataagcaagttaaccatgcacgaaatttgtgggatcgcgctgttaccatcatg
ccgcgcgttaatcagttttggtacaagtacacctatatggaggaaatgttggacaatgta
gcaggagcccggcaagtgtttgaacgctggatggaatggcaacctgaggaacaagcttgg
caaacctatgttaattttgaacttcgctataaagaaatcgatcgggcgcgtgcaatctat
gaacgtttcgtttacgttcaccctgatgttaaaaactggattaagtttgcgcgattcgaa
gagtcgcatggatttgtacacggagctcgacgggtttacgagcgagccgtggaattcttt
ggagatgattacatcgatgagcgactgtttattgcttttgcgcgatttgaagagggccag
aaagagcatgatagagcacgcgttatttacaaatatgcattagatcatctgtccaaagac
cgaacaaaggagctttataaagcttacacaatacatgagaaaaaatatggcgatagggca
ggtatcgaagatgttattgtgtccaagcgaaaattccaatatgagcaggaggtggctgct
aatccccaaaactacgatgcctggtttgactatctgcgtctcatcgaaggtgagggtgac
gttgatgtcatacgagaaacatatgagcgagccatctccaacgtcccaccggctaatgag
aaaaactattggcgtcgttatatttacttgtggataaattatgccctctacgaagaactg
gaagctgaagatttagaacgcactcgacaaatatataaaacctgccttgagcttattcca
cacaaaaaatttacattcagtaaaatttggctaatgtatgcacaatttgaaattcgatgt
aaagaattacaaaaggcacgtaaaacattaggaatggcgattggtatgagcccgcgggac
aagcttttccgaggatacattgagttggaaattcaactacgtgaattcgatcgctgtcgc
ttactttatgaaaagtttctcgaattcggtccggagaattgcgttacgtggatgaaattc
gcagagcttgaaaatttacttggtgacaccgaccgagcgcgcgctatctatgagctggcg
gtacaacagccgcgactcgacatgcccgagctactgtggaaagcgtatattgattttgaa
gtatcacagactgagactgagttggcacgtcagctttatgagcgtcttttggagcgcacg
catcatgtgaaagtatggatgtcttacgccaagttcgaattaacacaacacggcgctgaa
ttatccgacgatgatcctgaattaaatataaaactgtcgagacgtgtctatgagcgtgca
aatgacactttgcgcacttctggtgacaaagagtcgcgtgtattgttattagaagcatgg
cgtgactttgaaagagaagcgggcgatgttcacacactaaagaaggtgatggagaaaatg
ccccgtcgcgtgaaaaagcgtcaaaagatcgtatcagaaagtggagtggaagaagggtgg
gaggaaatatttgattacatattccctgaagatgaaatggcacggccaaatcttaaactg
cttgctgcagctaaaatgtggaaaaagcaaaaagaaactgtaagtacagaaccagcgtcg
agtgactctggcgaccttgtcaatacaacggtagatgagtaa
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integrated database retrieval system
