Rhagoletis zephyria (snowberry fruit fly): 108360653
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Entry
108360653 CDS
T08513
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108360653
Ion channels [BR:
rze04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108360653
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
STX6_10_61_N
MFD_D3
Motif
Other DBs
NCBI-GeneID:
108360653
NCBI-ProteinID:
XP_017468518
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MKITLREHPTSPIHHYRSSSDLCSATSRRDNNNISPATPATICHAQFNQPQIVESNNHYK
NDNRDTNFSTTMNNTKWNTRSFSGQRYQHSPPSQQEVSMRRSLEEISKDLKEIENVITAT
EIAVRNANKADQATSKRRRSNKTIPNKENKTPSPTERQSASQKTSPVTYKLNSFKRQRHK
MRSPRLTNSKLYFRNGRIGCLEADQHGSNIQGTHALVKHILKYVNEKPLVSPESVRRVLN
GTKTPTLSLSESAPTPPPVPVTPLKALPAVSAQSAESVLLPGQVPEESNAAVVVKSYSRC
SNNTANDSHSQRRPQSEGSSVTENTMSQPLVDDDEQDVQICYDELPDMLNDEQNFGPELV
KSDFAAVVPEEEVPTDRRFSATSLNSDVRDQVRHLVRRFTARANKVKSRIELPPTPSSST
SLDASTSTGGSVSPTRSLPAALKSVSTTRENSPFKTKLKDAAKSLNRGRLFEADTSRSNV
WICSSLCGSNNEEKTLDPQGKIYISWLCVVSLSFLYNAWVIPLRSTFPFQTPENTNAWLI
CDFCADIIYLLDVIFFKHRIMYLFEGFWVKNKNLTRKNYMRKLQFKLDLLALLPLELFYF
KYGTGAVYLRFPRLFKIQSFWEVFKLLDRVISSPHFVRVAKTLTYMLYMIHLTACAYYAY
SDYQGLGVNRWVFSGKGHPYVRCFAFATKTATSIGKNPKPEREGEYVFMTAAWLMGVFVF
ALLIGQIRDIISTATRNKNEYRQLEDETLEYMRRLNLPSEVQGRVKMWFKFTWEQQRTLD
EANILDSLPINLKTDIAIAVHIQTLSKVQLFADCEEALLRDLVLKLRAVTFLPGDCVCRK
GEVGREMYIIKLGQVQVMGGPHSDIVLATLSEGSVFGEISLLGINGADRRTADVRSKGYA
NLFVLSKSDLNEVIAYYPNAQAILKKRARALMRKNAAREREEERAKSALKADVVISNPKT
PETPPKLLKTVIQALPYESPAVILITRGSKRMRKKSKPNPLACIEDQECTEAAKVMNELR
CGVVGMLSGGVGGGVAVGSDGRRANSPDLLSSIQNELKSKNSFINLTDSQKALIISKSTN
SLEDQQQQQQQQSNCEEAALRGKGKV
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcactttgcgtgagcacccgacgtcaccgatccatcattatcgttcaagcagt
gacctttgcagtgccacaagtcgtcgcgacaacaacaacatttccccagccaccccagca
accatatgccacgcgcaatttaatcaaccccaaattgtcgaaagtaacaatcactataaa
aacgacaacagggacaccaacttctcaactacaatgaacaatacaaagtggaatacacgt
agcttcagcggtcaacgttatcaacactcaccgcccagtcaacaggaggtatctatgcga
cgtagcctagaggagatttccaaagatctaaaggagattgaaaatgtcattaccgcaaca
gaaattgctgtgcgcaacgccaataaagcagatcaagcgacatctaaacgtagacgtagc
aacaaaaccattccaaataaggagaataaaacaccgagtcccactgagcgccaaagcgct
tcgcaaaagacctcgcccgttacctataaattaaattcctttaagcggcaacgtcacaaa
atgcgtagtccgcgtcttacaaattcgaagctatattttcgcaatggccgcattggctgt
ttggaagccgatcagcatggctccaatatacaaggcacacacgcgctggtcaagcacatt
ttgaagtatgtcaatgagaaaccattggtaagtccggagagcgtacgtcgtgtgttgaat
ggtacgaagacgccaacgttgtcgttgtcggagtcggcaccaacaccgccgccagtgcca
gtaacaccgttaaaggctttacccgctgtgtcggcacaaagcgccgaatcagtgctgctg
cctggacaagtgcctgaagagtctaatgctgctgttgttgttaagagttattcgagatgc
agcaataatacggcaaatgatagccacagtcagcgcaggcctcaaagtgaaggctcctcg
gtgacggagaatactatgtcgcagccattggtcgacgatgatgagcaggatgtgcaaatc
tgctatgatgagctgccggacatgttgaatgatgaacaaaattttggaccagaattggtg
aagagcgattttgcagcggtggtgccggaagaggaagtgcctacagataggcgcttcagc
gcgacgagtctcaactcagacgtacgtgaccaagtgcgccatcttgtacgccgcttcacg
gcacgcgctaacaaagttaaatcgcgcatagagttgccacccacaccgtcgtcgagtacc
agcctcgatgccagcaccagcactggcggttcggtctcgccgacgcgctcactcccagcc
gctctcaaatctgtcagtacaacgcgcgagaattcgccattcaaaaccaaactgaaggat
gccgccaagtcgctgaatcgtggtcgtctcttcgaagcggacacctcacgttcgaatgtg
tggatttgttccagcctgtgtgggagcaataatgaggagaaaacactcgatccgcaaggc
aaaatctacatttcgtggttgtgtgtggtctcactgtccttcctctataatgcctgggtc
ataccgctgcgttccaccttccctttccagacgcccgagaatacgaacgcttggctgata
tgcgatttttgtgctgacattatttatctgttagatgttatcttctttaagcatcgaatt
atgtacctattcgagggtttttgggtaaaaaataagaatctaacgcggaagaattacatg
aggaagctgcaatttaagctggatttgctcgccctacttcctctggaacttttctatttc
aaatatggcaccggtgctgtttatttgcgctttccgcgcttattcaaaatccaaagtttc
tgggaggtcttcaagctactagatcgcgtcatatcttccccacatttcgtgcgcgtggct
aaaaccctgacctatatgttgtatatgatccatctaactgcttgtgcctactatgcctac
agtgactaccaaggcttgggcgtgaatcgttgggtctttagcggcaaaggacatccctac
gtgcgttgttttgcattcgctactaaaactgcaacgtctataggtaaaaatcctaagccc
gagcgtgagggggaatatgtcttcatgaccgccgcttggctaatgggtgtctttgttttc
gcattgctgatcggtcagatacgcgatatcatttcgacggcaacgcgcaataaaaatgaa
taccgacaactggaggacgagaccttggagtatatgcgacgtttgaatttgccaagtgaa
gtgcagggccgcgtgaaaatgtggttcaaatttacttgggagcaacagcgtactctggat
gaagccaacatattggactcactaccgattaatttgaaaacagatatcgctatcgctgta
cacatacaaaccctctctaaggtgcaacttttcgccgattgcgaggaggctctactacgc
gacttggtgctaaaattgcgcgctgtcactttcctgccgggcgattgtgtttgtcgcaag
ggtgaagttggccgcgaaatgtacattattaagctgggacaagtgcaggtgatgggcggc
ccacatagtgatatcgtattggccacactctccgagggttcagtctttggcgagatcagt
ttactgggcataaatggcgccgatcgccgtacggccgatgtacgctccaaaggttatgcc
aatctctttgtactctccaaatccgatctcaacgaagtgatcgcttactatcctaacgca
caagccattctaaagaagcgagcacgcgcactaatgcgtaagaatgccgcacgtgaacgt
gaagaagagcgcgccaaaagcgcactgaaggccgatgtggttataagtaatccgaagaca
cccgaaacaccgcccaaattgctaaagactgttatacaggctttgccttatgagtcgccc
gctgtgattctgataacgcgtggttctaagcgcatgcgcaagaaaagtaaacccaatccg
ttggcgtgcattgaggatcaagagtgtacggaagcggctaaagtgatgaatgagttgcgt
tgcggcgtggtgggtatgttgagtggcggcgtaggtggaggcgtagcggtaggcagcgac
ggtaggcgtgccaattcacccgatttgttatcatcaatacaaaatgagttgaaaagcaag
aacagtttcataaacttaaccgattcacaaaaggcgttgataatctcgaaatccacaaac
agtttagaggaccagcagcagcagcagcagcagcagagcaattgtgaggaggcagcattg
aggggcaagggaaaagtttaa
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