Rhagoletis zephyria (snowberry fruit fly): 108370407
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Entry
108370407 CDS
T08513
Name
(RefSeq) transient receptor potential-gamma protein
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Pathway
rze04745
Phototransduction - fly
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09150 Organismal Systems
09157 Sensory system
04745 Phototransduction - fly
108370407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108370407
Ion channels [BR:
rze04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108370407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
PKD_channel
Ank
Ank_3
Ank_4
Ank_5
Holin_BhlA
DUF7792
Motif
Other DBs
NCBI-GeneID:
108370407
NCBI-ProteinID:
XP_017481229
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MMEEENIVRPHQEIRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTDYINVNCVDPLGRT
ALLMAIDNENLEMVELLISYNVDTKDALLHSISEEFVEAVEVLLDHENVTFHTEGNHSWE
SQSEDTSTFTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSL
RHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQD
FATALLDHTRTSHELEILLNHDPTGPIYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLL
ASIWYEGLPGFRRKNMALQALDIIRIGIMFPIFSWAYILAPYSSIGQTMRKPFIKFICHS
ASYFTFLFLLMLASQRIETFIGGWFWSDTNNIIAQVEEVPTKRGAKPTFIEWLILAWVSG
LIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIINPHATDL
PRERWDTWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLY
VLVLFAFGSGLNQLLWYYADLEKKRCPEVSPSNVLITMNGTTDPNACIVWRRFSNLFETT
QTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLIS
ERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYVFKWARRVFCSGSSAARREH
LKTIRRKAQQASDRDFKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNEIKQDISAFRCE
LVEILKNSGMDTNVSAGQGGGGGKKNRQKERRLMKGFNIAPPGSTGSLAPVAEFSTSLDN
FDTQHEILSNTLSNLFNSNFIHKNQQNGQTSGKESPTNGTTTTTTTIQTTTKYNKSALKP
HNKRIAGHKKRWGTLIEAAKVGNVSKMLGRSKSEDSMCNSSANSSPVHGQVRVTYAQNSA
QHYMSSSGETTTTGSHRANAHTPTHSAGIHGGIFMKDHSSSLNSGSGNSVSSNGGNGASH
FFHTTTGLTAIAALKKKRKKFSSSKNICPVNESISTANGTAEAALNDKSLKRVSSYPASH
ADGVTPSGKDATITAKPRRHEQTQSQHDSVETSTEFTLSNETHHLDPSNTSVNSREPLIS
GSYASTSIMG
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggagaacatagtgcggccgcatcaggagatacgccagttaaccttggag
gagaagaagtttctattggcggtggagcgtggtgatatggcgggtacgcgaagaatgcta
caaaaggcacaggacactgattacatcaatgtcaattgtgtggatccattgggacgcact
gctctcctcatggccatcgataatgagaatttggaaatggtcgaactactcatcagttat
aatgttgacaccaaggatgcgctgttgcactcaatatcggaggagttcgtggaagctgtg
gaagtgctgttggatcacgagaatgtcacttttcatacggagggaaatcatagctgggaa
tcccaatcggaggacacttcaacattcacacccgatattacgccacttattttggcggca
catcgtgataactatgaaataatcaaaatattattagatcgcggagccgtactgccaatg
ccgcatgatgtaagatgcggctgtgacgaatgtgttcaatcacgccaagaagattcactg
cgacactcacgttctcgcatcaacgcctatcgtgcactggccagtccaagcctcattgca
ttgtcgtcgaaggatcctattttaactgcatttgaattatcctgggaattgagacgttta
agtttcctcgaacacgaatttaagaatgaatatcaggaattgcgcaaacaatgccaagac
tttgccaccgctttgcttgatcatacacgcacctcacacgaattggaaatcctattaaat
cacgatcccaccggtccaatctatgaacatggcgaacgtatgcatttgaatcgtttgaaa
ttggctataaagttgcgtcagaaaaaatttgtggcacactcaaatgttcaacaactttta
gccagtatttggtatgagggtctaccgggatttcggcgtaaaaatatggctctgcaggcg
ttggatattataagaattggcataatgtttcccatcttctcgtgggcctacattttggca
ccctactccagtattggacagactatgcgtaaaccatttatcaaattcatatgccacagt
gcctcctactttacatttctatttctactgatgctcgcttcacaacgcatcgaaacattc
attggtggctggttttggagcgatacgaacaacatcatcgcacaagtggaggaggtgcct
acaaagcgtggcgcgaaaccgacgtttatcgaatggctgatattggcctgggttagcggt
ctaatttggagcgaggtcaagcagctgtgggatgttggtctgcaagagtatctcaacgat
atgtggaatgtcatcgatttcgtaacgaattcactctatgtggccacagtggcattacgt
gtggtgtctttctttcaggtgcaaaaagaaatgatcattaatccgcatgccactgatttg
ccgcgtgagcgttgggacacatgggatccaatgctcatttcggaaggactctttagtgcg
gcaaacattttcagtagcctcaaattggtatacatcttttcggtgaatccacatttggga
ccactgcaagtgtccctgtcgcgtatggttatggatatcatgaagtttttctttttgtac
gtactcgtgctattcgccttcggcagtggtctgaatcaattgttgtggtactacgcagat
ttggagaagaaacggtgccctgaagtttcgccctcgaatgtacttatcaccatgaacgga
accacagatccgaatgcttgcatcgtttggcggcgcttttcgaacctcttcgaaaccaca
cagacacttttctgggctgtttttggtctaatcgatttggatagctttgagttggatggc
attaagattttcacacgtttctggggcatgctaatgtttggcacatattccgttatcaac
attgtggtgctgctgaatctacttattgctatgatgaatcattcatatcaacttatatcg
gagcgtgctgatgttgaatggaaatttgcgcgttccaaattgtggataagttactttgag
gaaggtggcacctgcccaccaccattcaatattataccaactccaaaatccatatggtat
gtgttcaagtgggcgcgtagagtattttgcagtggctcttcggctgccagacgtgagcat
ttaaagacaatacggcgtaaagcgcagcaggcgagtgatcgcgatttcaaatatcagcaa
ataatgcgcaatttagtgcgtcggtatgtgaccgtggagcaacgcaaggccgagtcgcag
ggtgtcaccgaagatgacgtgaacgaaatcaaacaggatatatcggcattccgttgcgaa
ttagtggaaattttgaagaatagtggcatggataccaacgtttctgcgggacaaggcggt
ggtggtggcaagaagaaccgtcaaaaggagcgccggcttatgaaaggctttaatattgcg
ccacctggttctaccggttcattggcgccggtagcggaattctccacatcgctggacaat
ttcgatacacaacatgaaatacttagtaacacactatcgaatcttttcaattcaaatttc
atacacaaaaatcaacagaatggtcagacaagcggcaaggaatcgccaacaaatggcact
acgacaacaacaaccacaatacaaacgacaacaaaatataataaatcggcattgaaaccg
cacaataagcgcattgccggccacaagaagcgttggggtacactcatcgaggccgccaaa
gtgggaaatgtctcaaaaatgctaggccgctccaaatcggaagactccatgtgcaattcc
tcggccaattcgtcgccagttcatggccaggtgcgcgtcacatatgcacagaattctgcg
cagcattacatgagcagcagtggcgaaacgactacgacaggcagtcatcgtgccaatgca
cacacgccgacacacagcgccggcatacatggtggcatattcatgaaggatcacagcagc
agcttgaatagcggcagcggtaatagtgtcagcagcaatggtggtaacggtgcttcgcat
ttctttcatacaacaaccggtctcactgccatagccgctttgaaaaagaagcgcaagaag
ttttcatcgagtaagaatatctgtcccgttaacgaatccatatccactgccaatggaacg
gctgaggcagcattgaacgacaagtcgcttaagcgcgtttccagctacccagcctcacat
gcggatggcgtcacgccaagtggcaaagatgccacaatcaccgccaaaccgcgtcgccat
gaacagacacaaagtcaacatgactctgtcgaaacgtcaacggaatttacactctccaat
gagacacatcatttggatccatccaatacatccgtcaattcgcgtgaaccattaattagt
ggcagttatgcatcgaccagtataatgggttaa
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integrated database retrieval system
