Rhagoletis zephyria (snowberry fruit fly): 108379595
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Entry
108379595 CDS
T08513
Name
(RefSeq) sodium channel protein para-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
rze
Rhagoletis zephyria (snowberry fruit fly)
Brite
KEGG Orthology (KO) [BR:
rze00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rze04040
]
108379595
Ion channels [BR:
rze04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
108379595
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Na_trans_assoc
IQ_SCN5A_C
GPHH
DUF4984
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
108379595
NCBI-ProteinID:
XP_017491438
LinkDB
All DBs
Position
Unknown
AA seq
1421 aa
AA seq
DB search
MVLNDIIEQAAIDRTQVNGPTERERTHFGGDEETESRDHLGYVPEYASEAGSIEGMSSVS
SYDHPPLKERFVAGCLKFVDILCVWDCCWCWVRVQELVALIVFDPFMELFITLCIVVNTL
FMAIDHYQMDKDIDQILFNGNLFFTFIFGIEAGFKLIALSPKFYFREGWNIFDFVIVVLS
LLELSLASVNLSGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGKTVGDLGNLTFVLAIII
FIFAVMGMQLFGKYYTAENFKGKDIPRWNFCDFMHSFMIVFRVLCGEWIESMWDCMHVSG
NVCVPFFLTTVVIGNLVVLNLFLALLLASFGASNLSAPSSDSADTKKLQEAFDRFSRGGK
WVKNKILQLMKYIRSKTRNQIGDQTADRPPHEDMLADMEMTMMTTTCHHGDVIYVDGGLS
LNKSMANNTRAVADSELELRLLRASANLRNGGSGANVGNLSNQAPMGNNVQASLAVPGAN
NAQNAVGRLPVTTNGNGLNSRASSTVATAARLPLSQAQSDNGNEDESGDESATSSEEADA
GEHETSGSNEELPESRVRRRRRRKKALSTTHSSDQLLNLEQQSQEEGQQGNEGNEVLSLM
VPTGFGVGQLSSMTPNMQMNGALDTSATSLNASGDKIDTATADVIISEYPAECFPDNMYQ
YCPWCLAETPFWIRWKEIRLRCYQTVEHKYFETLVITLILISSLALALEDANFKKNPVFM
EYLAIVDKFFTVIFFFEMLVKWLAFGFVKYFTNAWCWLDFVIVMTSILNLCVSFLGLSRI
PAFKTMRTLRALRPLRAMSRLEGMRVVVNALVQAIPAIFNVLLVCLIFWLIFSIMGVQLF
MGKFYQCIDRTTRQKLNSSYVPNYKACIARNHTIWFNPQINFDNVPNAYLALFQVATFKG
WLDIMNNAIDSRQDHLDQPEKEGNIYMYLYFVFFIMFGAFFTLNLFIGVIIDNFNEQKKK
AGGSLEMFMTEDQKKYYNAMKKMGSKKPMKAIPRPRFKLQAIIFDITTNKKFDMIIMLFI
ALNMIIMSMDQYKQERTLGSILESLNHFFIVIFTSECLLKIFALRWHYFKEPWNMFDFVV
VILSILGVLLKDIIAKYIVSPTLLRVVRVVKVGRVLRLVKGARGIRTLLFALAMSLPALF
NICLLLFLVIFIYAIFGMSFFMNVKQRYGIDETFNFSTFFKSFILLFQMSTSAGWAEVLA
AIMDDQDCTPTRGDNEGDCGNKSIAIVFLISYLIISFLIIINMYIAVILENYSQATEDVH
EGLTDDDYDMYYEIWQKFDPKGTQFISYSQLSDFVHTLEEPLQIPKPNKFKLISMDIPIC
VEDKVYCVDILDALTKDFFARKGHVIEESVELAEVAPLKMGEFEHISSTLWRQREVHCAR
ILQKGWRDYVASRRAGETGQKLDRIEEGDEEQSAPSERHEM
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcaacgatatcatcgaacaagcggcaatagaccgcactcaggtgaacgggccc
actgaaagagaaaggacccattttggaggcgatgaggagacggagtcgagagatcatctc
ggctacgttcccgagtacgcctccgaagcagggtccatagagggcatgtcctctgtgtcc
agctacgaccatccgcccctcaaggagcgatttgtcgccggctgtctcaagtttgtcgac
atcctctgcgtctgggactgctgctggtgctgggtacgggttcaagagctagtcgccctc
atcgtctttgaccccttcatggagctcttcatcacactgtgcattgtcgtcaacacgctc
tttatggccatcgatcactaccaaatggacaaagacattgaccaaattctcttcaatgga
aacttgttttttacctttatttttggcatcgaagcaggcttcaagctgatagccctaagt
ccaaagttttattttcgagaaggctggaacatatttgactttgtcattgtagttttgtcc
ctacttgagctcagtcttgcatcggtaaacttgtctggcttgtctgttttgcgttcattc
cgtttgctgcgtgttttcaagctggccaaatcatggcccactctaaacttgctcatctca
atcatgggtaaaactgtcggtgacttgggtaatctcacatttgtgctggccattattatc
ttcatctttgccgtcatgggaatgcagcttttcggcaagtactacacagccgaaaacttc
aaagggaaggacatacctcgctggaacttctgtgatttcatgcactcctttatgatcgtc
tttcgggtgctctgcggcgagtggattgagtcgatgtgggactgcatgcatgtttcgggc
aatgtctgtgtgcccttcttcctcaccacggtcgtcattggcaatctggtggtgctcaat
ctctttctcgcccttctgctcgcctcttttggcgcctccaacttatcggcgccctcttcc
gacagtgccgacactaagaagctgcaggaggcttttgatcgattctcacgcggcggaaag
tgggtcaagaacaaaattcttcaacttatgaagtacatacgctctaaaacgcgtaatcaa
ataggcgatcaaactgccgatcgaccaccgcacgaagatatgctcgcagacatggaaatg
accatgatgaccaccacctgtcatcacggcgatgtcatctacgtcgatggtggcctgagc
ttgaacaaatcaatggcgaacaataccagagcggtggcagactctgagctagagctgaga
ctgctgagagcttcggccaatctacgcaacggcggaagtggcgctaatgtgggcaacctc
tccaaccaagcgccaatgggaaacaatgtgcaggcctcactggcggttccaggtgcaaac
aatgctcaaaacgctgtgggccgattgcctgtcaccacaaatggcaatggcctcaactcg
agggcatcttccactgtagccacagcggcgcgtctcccactctcacaggctcaatcggac
aatggaaacgaggatgaaagcggcgatgaaagtgcaacgtccagtgaggaggcggacgcc
ggtgaacacgagacatcaggctccaatgaagagctaccggaaagtcgagttcgtcggcgg
cggcggagaaagaaagcgctcagcacgactcattccagtgatcaactgctcaatttggaa
cagcaaagtcaggaggaaggacagcagggcaatgagggcaatgaggtgctttccctgatg
gtgcccactggttttggcgttggccaactgtccagcatgacgccgaacatgcaaatgaac
ggcgccctggacacctccgctaccagcctcaatgccagtggagacaaaatagacactgcc
actgccgatgtcataatcagcgagtaccctgccgagtgctttcccgacaacatgtaccag
tactgcccttggtgtctggctgaaactcccttctggatcaggtggaaggaaattcgccta
agatgctaccagacggtggagcacaagtactttgagacgctggtcattacgctcattctc
atcagcagcttggccctggctctagaagacgccaactttaagaaaaaccctgttttcatg
gagtaccttgccattgtggacaagttctttacagtgattttcttttttgaaatgctcgtc
aagtggctagcatttggttttgtcaaatactttaccaatgcctggtgctggcttgacttt
gtcattgtcatgacatcaatcttgaatttgtgtgtcagctttctgggcttgtctagaata
cctgccttcaagacgatgcggactttacgggcactgcgacctctgcgagcaatgtcccgt
cttgaagggatgcgcgtggtcgttaatgctttagtacaggccatcccagccatcttcaat
gtgctgcttgtctgtctcatcttctggctcattttttccatcatgggcgtacagttgttt
atgggaaagttttaccagtgcattgatcggacaactcgccaaaaactgaactcttcatat
gtgcccaactacaaagcttgcattgcccgaaatcacaccatatggtttaaccctcaaatt
aactttgacaatgttcctaacgcatatctcgcacttttccaagtggcaaccttcaaaggg
tggctagacatcatgaacaatgccatcgactcgaggcaagaccatctcgaccagccagaa
aaggaaggcaacatttacatgtatctctactttgtcttcttcattatgtttggtgccttt
tttacgctaaatctgtttattggtgtgattattgacaactttaatgaacaaaagaaaaaa
gccggcggctcactagagatgttcatgacagaggaccagaaaaagtactacaatgcaatg
aagaaaatgggctccaaaaaacctatgaaggctattcctcgaccaaggttcaaactgcaa
gctattatttttgatataacaacaaacaaaaagtttgacatgatcatcatgcttttcatt
gctttgaacatgatcattatgtctatggatcagtacaagcaagagcgaaccttgggaagc
attcttgaaagcctcaaccactttttcatcgtcatttttaccagcgagtgtttgctcaaa
atatttgctctccggtggcactacttcaaggagccttggaatatgtttgattttgttgtg
gttattctttccattctgggtgtcttactgaaagacattattgccaaatacattgtgtct
cccactttgcttagggtggttcgcgttgtcaaagtcggtcgagtcttgcgcctggtcaaa
ggagctcgaggcattcgaacgctgctctttgcactggccatgtccttgccggctctcttc
aacatttgtttactactttttcttgtcatcttcatctacgccatctttggaatgtccttc
ttcatgaacgtcaaacaacgctacggcatcgatgagaccttcaactttagtaccttcttt
aagtcttttatactgctttttcaaatgtctacttctgccgggtgggccgaggtgctggca
gcaatcatggacgaccaggactgtacaccgacaaggggcgacaatgaaggggactgtggc
aacaagagcattgccattgtctttctcatctcctacctcatcatttccttcctcattatt
atcaacatgtacattgccgtcatcttggagaactacagccaggcaactgaagacgtgcac
gagggtctcactgatgacgactacgacatgtactacgaaatatggcaaaagtttgaccca
aaaggaacgcaattcatttcctattcgcagttgtctgactttgtgcacactctagaggag
ccgttgcaaatccccaagccaaataagttcaaattgatctctatggacattcctatctgt
gtggaggacaaggtctactgcgtggacattctcgatgcactgacgaaagacttctttgcg
cgcaaaggtcacgtcatcgaggagtctgttgagctggccgaagtggcgcccctgaagatg
ggagagtttgagcacatcagcagcacactgtggcgtcagcgagaggtccactgtgcaaga
atactccagaaaggctggcgcgactatgtggctagcagaagagcaggtgaaacggggcaa
aagttggatcgaatagaggaaggcgacgaagaacaaagtgcacccagtgaacgccacgaa
atgtaa
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