Staphylococcus aureus RF122: SAB1561c
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Entry
SAB1561c CDS
T00303
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sab
Staphylococcus aureus RF122
Pathway
sab03030
DNA replication
sab03430
Mismatch repair
sab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAB1561c (dnaE)
03430 Mismatch repair
SAB1561c (dnaE)
03440 Homologous recombination
SAB1561c (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sab03032
]
SAB1561c (dnaE)
03400 DNA repair and recombination proteins [BR:
sab03400
]
SAB1561c (dnaE)
Enzymes [BR:
sab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAB1561c (dnaE)
DNA replication proteins [BR:
sab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAB1561c (dnaE)
DNA repair and recombination proteins [BR:
sab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAB1561c (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAI81250
LinkDB
All DBs
Position
complement(1688570..1691767)
Genome browser
AA seq
1065 aa
AA seq
DB search
MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVEALAITDTNVLYGFPKFYDACIANNIKP
IFGMTIYVTNGLNTIETVVLAKDNNGLKDLYQLSSKIKMNSMENVSFELLQQFSSNLIII
FKNVADEHRDIVQDFDSHEDTYLDHRSVLVQGIKHVWIQNVCYQTRQDADTISALAAIRD
NTKLDLIHDQEDFGAHFLTEKEIKQLDINQEYLTQVDVIAQKCNAELKYHQSLLPQYQTP
NDESAKKYLWRVLVTQLKKLELNYDVYLERLKYEYKVITNMGFEDYFLIVSDLIHYAKMN
DVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLFERFLNPERVTMPDIDIDFEDTRRERV
IQYVQEKYGELHVSGIVTFGHLLARAVARDVGRIMGFDEVTLNEISSLIPHKLGITLDEA
YQIDDFKKFVHRNHRHERWFSICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTKGDTGL
LTQWTMTEAERIGLLKIDFLGLRNLSIIHQILTQVKKDLGINIDIEKIPFDDQKVFDLLS
QGDTTGIFQLESDGVRSVLKKLKPEHFEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQY
LHPHLEPILKNTYGVIIYQEQIMQIASTFANFSYGEADILRRAMSKKNRAVLESERQHFI
EGAKQNGYHEDISKQIFDLILKFADYGFPRAHAVSYSKIAYIMSFLKVHYPNYFYANILS
NVIGSEKKTAQMIEEAKKQSITILPPNINESHWFYKPSQEGIYLSIGTIKGVGYQSVKVI
VDERYQNGKFKDFFDFARRIPKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGD
LNIEQDGFLFDILTPKQMYEDKEELPDALISQYEKEYLGFYVSQHPVDKKFVAKQYLTIF
KLSNAQNNKPILVQFDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQFKKYEALLSHN
DLFIVSGKFDLRKQQRQLIINEIQALATFEEQKLAFAKQIIIRNKSHIDTFEEMIKATKK
NANDVVLSFYDETIKQMTTLGYINQKDSMFNNFIQSFNPSDIRLI
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggtggcatatttaaatattcatacggcttatgatttgttaaattcaagtttaaaaata
gaagatgccgtaagacttgctgtgtctgaaaatgttgaagcacttgccataactgacacc
aatgtattgtatggttttcctaaattttatgatgcatgtatagcaaataacattaaaccg
atttttggtatgacaatatatgtgacaaacggtttaaacactattgaaaccgttgtttta
gcaaaagataataatgggttgaaggatttatatcaactttcatcgaaaataaaaatgaat
tcaatggaaaatgtttcatttgaactattgcaacaattttcatcgaatttgattatcatt
tttaaaaatgttgcagacgaacatcgtgacattgttcaagattttgattcgcatgaagat
acgtatttagatcatcgaagtgttttagttcagggtataaagcacgtatggattcaaaat
gtttgttaccaaacacgtcaagatgccgatacgatttctgcattagcagctattagagac
aatacaaaattagacttaattcatgatcaagaagattttggtgcacattttttaactgaa
aaggaaattaagcaattagatattaatcaagaatatttaacgcaggttgatgttatagct
caaaagtgtaatgcagaattaaaatatcatcaatctctacttcctcaatatcagacacct
aatgatgaatcagctaaaaaatatttgtggcgtgtcttagttacacaattaaaaaaatta
gaacttaattatgacgtctatttagagcgattgaaatatgagtataaagttattactaat
atgggttttgaagattatttcttaatagtaagtgatttaatccattatgcgaaaatgaat
gatgtgatggtaggtccaggtcgtggttcttcagctggctcactggtcagttatttacta
ggtattacaacgattgatcctattaaattcaatctattatttgaacgttttttaaaccca
gaacgtgtaacaatgcctgatatagatattgactttgaagatacacgccgagaaagggtc
attcagtacgtccaagaaaaatatggcgagctacatgtatctggaattgtgactttcggt
catctgcttgcaagagcagttgctagagatgttggaagaattatggggtttgatgaagtt
acattaaatgaaatttcaagtttaatcccacataaattaggaattacacttgatgaagca
tatcaaattgacgattttaaaaagtttgtacatcgaaaccatcgacatgaacgttggttc
agtatttgtaaaaagttagaaggtttaccaaggcatacatctacacatgcggcaggaatt
ataattaatgaccatccattatatgaatatgcccctttaacgaaaggggatacaggatta
ttaacgcaatggacaatgactgaagccgaacgtattggtttattaaaaatagattttcta
gggttgagaaacttatcgattattcatcaaatcttgacacaagtcaaaaaagatttaggt
attaatattgatatcgaaaaaattccgtttgatgatcaaaaagtgtttgatttgttgtcg
caaggagatacgactggcatattccaattagagtctgacggtgtaagaagtgtattaaaa
aaattaaagccggaacactttgaagatattgttgctgtaacttctttgtatagaccaggt
ccaatggaagaaattccaacttacattacaagaagacatgatccaagcaaagttcaatat
ttacatccacatttagaacctatattaaaaaatacttacggtgttattatttatcaagag
caaattatgcaaatagcgagcacatttgcaaacttcagttatggtgaagcggatatttta
agaagagcaatgagtaaaaaaaatagagctgttcttgaaagtgagcggcaacattttata
gaaggtgcaaagcaaaatggttatcacgaagacattagtaagcaaatatttgatttgatt
ctgaaatttgctgattatggttttcctagagcacatgctgtcagctattctaaaattgca
tacattatgagctttttaaaagtccattatccaaattatttttacgcaaatattttaagt
aatgttattggaagtgagaagaaaactgctcaaatgatagaagaagcaaaaaaacaaagt
atcactatattgccaccgaacattaacgaaagtcattggttttataaaccttcccaagaa
ggcatttatttatcaattggtacaattaaaggtgtaggttatcaaagtgtgaaagtgatt
gttgatgaacgttatcagaacggcaaatttaaagatttctttgattttgctagacgtata
ccgaagagagtcaaaacgagaaagttacttgaagcactgattttagtgggagcgtttgat
gcttttggtaaaacacgttcaacgttgttgcaagctattgatcaagtgttggatggtgat
ttaaacattgaacaagatggttttttatttgatattttaacgccaaaacagatgtatgaa
gataaagaagaattgcctgatgcacttattagtcagtatgaaaaagaatatttaggattt
tatgtttcgcaacacccagtagataaaaagtttgttgccaaacaatatttaacaatattt
aaattgagtaacgcgcagaataataagcctatattagttcagtttgataaagttaaacaa
attcgaactaaaaatggtcaaaatatggcattcgtcacattaaatgatggcatcgaaact
ttagatggtgtgattttccctaatcagtttaaaaagtacgaagcgttgttatcacataat
gacttgtttatagttagcgggaaatttgaccttagaaagcaacaacgtcaactaattata
aatgagattcaggcattagccacttttgaagaacaaaaattagcatttgccaaacaaatt
ataattagaaataaatcacatatagatacgtttgaagagatgattaaagctacgaaaaaa
aatgccaatgatgttgtgttatccttttatgatgaaacgattaaacaaatgactacttta
ggctatattaatcaaaaagatagtatgtttaataattttatacaatcctttaaccctagt
gatattaggcttatataa
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