Saccharomonospora xinjiangensis: EYD13_12255
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Entry
EYD13_12255 CDS
T05928
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sacc
Saccharomonospora xinjiangensis
Brite
KEGG Orthology (KO) [BR:
sacc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sacc03051
]
EYD13_12255 (pafA)
Enzymes [BR:
sacc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
EYD13_12255 (pafA)
Proteasome [BR:
sacc03051
]
Prokaryotic proteasome
Bacterial regulatory particles
EYD13_12255 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QBQ60804
LinkDB
All DBs
Position
complement(2649280..2650638)
Genome browser
AA seq
452 aa
AA seq
DB search
MQRRIFGIETEFGVTCTFHGQRRLSPDEVARYLFRRVVSWGRSSNVFLSNGSRLYLDVGS
HPEYATAECDDLTQLVTHDKAGERILEDLLVDAERRLADEGIGGDIFLFKNNTDSAGNSY
GCHENYLVTRAGEFSRVADVLLPFLVTRQLICGAGKVLQTPRGAVYCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMAEPTTLLKVGSVNLVLEMIEEGIQF
RDFTLDNPIRAIREISHDLTGRRQVRLAGGREASALEIQREYYARAVQHVEAGGGSPASR
QVIDLWGRALDAVEQQDFSGIDTEIDWAIKHRLVERYRSKHNLVLSDPRIAQLDLAYHDI
RRGRGVFDLLQRKGLVRRITDDGEIELAKDTPPQTTRAKLRGDFIAAAQQAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVERLISSL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggcggatctttgggatcgaaaccgagttcggggtcacctgcaccttccacggg
cagcgaaggttgtctcccgacgaagtggcgcgctacctgttccggagggtcgtgtcctgg
ggccggtcctcgaacgtgttcctgtccaacggctcccgcctgtatctcgacgtggggtcg
caccccgagtacgccaccgccgagtgtgacgacctgacacagctggtgacacacgacaag
gcgggcgagcggattctggaggatctgctcgtcgatgccgagcgccgcctcgcggacgag
ggcatcggcggcgacatcttcctcttcaagaacaacaccgactcggcaggcaattcctac
ggctgccacgagaattacctcgtgacccgcgcgggtgagttctcgcgggtggcggacgtg
ctcctgccgttcctcgtgacccggcagctcatctgcggggcggggaaggtgctgcagacg
ccgcgtggcgcggtgtactgcctctcccagcgagccgagcacatctgggagggcgtgtcg
agcgcgacgacgcgctcccggccgatcatcaacacgcgcgacgagccgcacgccgacgcg
gaacgctaccgcagactgcacgtgatcgtcggggattcgaacatggcggagccgacgacg
ctgctgaaggtcggctcggtcaacctcgtgctggagatgatcgaggagggcatccagttc
agggacttcacgctggacaacccgatcagggcgatcagggagatcagccacgacctgacg
gggcggcggcaggtgcggctggcaggaggcagggaggcctcggcgctggagatccagcgt
gagtactacgccagggccgtgcagcacgtggaagcgggaggagggtcgcccgcgtcgcgc
caggtgatcgacctgtggggcagggcgctggacgccgtggaacagcaggacttctccggt
atcgacaccgagatcgactgggcgatcaagcatcggctcgtcgagcgctaccgcagcaag
cacaacctggtgctgtccgatccgagaatcgcgcagctcgacctcgcctaccacgacatc
cgtcgcggccggggcgtgttcgatctgttgcagcgcaagggtttggtgcggcgcatcacc
gacgacggcgagatcgaactcgccaaggacaccccgcctcagaccacgcgcgcgaagctg
cggggtgacttcatcgccgcggcgcagcaggcggggcgtgacttcaccgttgactgggtg
catctgaagttgaacgaccaggcccagcggacggtgttgtgcaaggacccgttccgctcc
gtggacgagcgggtcgaacggttgatcagctcgctctga
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