Allosaccharopolyspora coralli: GIY23_15675
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Entry
GIY23_15675 CDS
T06288
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sace
Allosaccharopolyspora coralli
Pathway
sace03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sace00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GIY23_15675 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sace03019
]
GIY23_15675 (recQ)
03400 DNA repair and recombination proteins [BR:
sace03400
]
GIY23_15675 (recQ)
Enzymes [BR:
sace01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GIY23_15675 (recQ)
Messenger RNA biogenesis [BR:
sace03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GIY23_15675 (recQ)
DNA repair and recombination proteins [BR:
sace03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GIY23_15675 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
QGK70763
UniProt:
A0A5Q3Q8Q8
LinkDB
All DBs
Position
complement(3348521..3350365)
Genome browser
AA seq
614 aa
AA seq
DB search
MTATDLAAEPDDRALDVLRRVFGYESFRGEQRAIVEQVIDGGDALVLMPTGGGKSLCYQV
PSLVRGGVGVVISPLIALMQDQVNALRASGVRAGFLNSTQDAEQRRETEAAFLAGELDIL
YLAPERLRLDSTVNLLGRGEVALFAIDEAHCVSQWGHDFRPDYLTLSELHERWPSVPRIA
LTATATEATHAEITERLNLREARHFVASFDRPNIQYRIVAKKDPKKQLLELLRTEHVGDA
GIVYCLSRSSTEKVAQFLRDNGIEAVPYHAGLDADVRARHQARFLREDGLVVVATIAFGM
GIDKPDVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVQQRKMIDNSEGD
AAHRRKLGAQLDAMLALCETVECRRVQLLAHFGQQGAPCGNCDTCLNPPQSWDGTVPAQK
LLSTVYRLRNERNQKFGTGQIVDILLGKTTPKVEQNRHDTLTVFGVGTELREIEWRGVVR
QLLAQGLLTVEGDHGTLTLTESSGEVLGQRRTVSLRQEPARVTNKPAKAKRASPVEQLSQ
DAEPRFEQLRAWRAVTAKQQGVPAYVIFHDSTLRQIATVAPSTLDELATVTGVGEAKLDK
YGQGVLDALAEPAG
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactgccaccgacctcgccgcggagccggacgatcgcgccctcgacgtgctccggcgc
gtcttcggctacgaatcgttccgaggtgagcagcgcgccatcgtggagcaagtgatcgac
ggcggcgacgcgctcgtcctgatgccgaccggcggtgggaagtcattgtgctaccaggtc
ccgtcgctcgtccggggcggcgtcggcgtcgtgatctccccactcatcgcgctcatgcag
gatcaggtcaacgcgctacgcgcctcgggcgtgcgcgcgggattcctgaactccacccag
gacgccgagcagcgccgcgagaccgaggccgcgttcctcgcaggagaactcgacatcctg
tatctcgctccggaacggctccggctggactcgaccgtgaacctcctcggccgcggcgag
gtcgcgctgttcgcgatcgacgaggcgcattgcgtgtcccaatggggccacgacttccgt
ccggactacctcacgctctccgaactgcacgagcggtggccgtcggtgccgcgcatcgcg
ctgaccgcgaccgcgaccgaggccactcacgccgagatcaccgaacgcctcaacctgcgc
gaggcgcgccatttcgtggcgagtttcgaccgtccgaacattcagtaccggatcgtggcg
aaaaaggacccgaagaagcagctgctggaactgctgcgcaccgaacacgtcggtgacgcc
ggaatcgtctattgcctttcccggtcctcgacggagaaggtcgcgcagttcctgcgagac
aacgggatcgaggccgttccgtaccacgcgggactggacgccgacgtccgcgcgcgacac
caagcgcgattcctgcgcgaggacggcctggtcgtggtcgccaccatcgcgttcgggatg
ggcatcgacaagccggacgtccgcttcgtggctcacctcgacctccccaagtcggtggag
gggtattaccaggaaaccggccgtgcgggacgagacggcctcccgtcgacggcgtggctg
gcgtacggactgcaagacgtcgtgcaacaacgcaagatgatcgacaactcggagggcgac
gcggcacatcggcggaagctgggcgcccagctggacgcgatgctggccttgtgcgagacc
gtcgagtgccgtcgcgtgcagctgctcgcccacttcggacagcagggtgcgccgtgcggc
aactgcgacacgtgcctgaacccgcctcagtcgtgggacggcaccgttccggcgcagaag
cttttgtccactgtgtaccgactgaggaacgagcggaaccagaagttcggcaccggacag
atcgtcgacatcctgctcggcaagaccacgcccaaggtcgagcagaaccggcacgacacg
ctgacggtcttcggcgtcggcaccgaactccgcgagatcgagtggcgcggggtcgtgcga
caactgctcgcccagggactcctgaccgtggaaggcgatcacgggacactcaccctcacc
gagtccagcggagaggttctggggcaacgacgcacggtgtcccttcgccaggagccggcg
cgagtcaccaacaagcccgccaaggccaagcgggcttcgccggttgagcagctttctcag
gacgccgaaccgcgcttcgagcagctacgtgcttggcgagccgtcaccgccaaacagcag
ggtgtgcccgcgtacgtcatcttccacgactcgacgctgcgccagatcgccaccgtcgca
ccgtcgaccctcgacgagctggcgaccgtcaccggtgtcggcgaggcgaaactcgacaag
tacggccaaggggtcctcgacgcgctcgccgaacccgcgggctag
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