Saccharopolyspora sp. ASAGF58: FDZ84_22480
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Entry
FDZ84_22480 CDS
T06538
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sacg
Saccharopolyspora sp. ASAGF58
Pathway
sacg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sacg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDZ84_22480 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sacg03400
]
FDZ84_22480 (uvrB)
DNA repair and recombination proteins [BR:
sacg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDZ84_22480 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDZ84_22480 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_16
AAA_22
DUF87
UvrD-helicase
HEM4
AIG1
Motif
Other DBs
NCBI-ProteinID:
QIZ36911
UniProt:
A0A6H1R916
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All DBs
Position
4672051..4674207
Genome browser
AA seq
718 aa
AA seq
DB search
MAFATEHPVLAQSEFRPVSDIPRIDGRFRMVSDYEPAGDQPQAIEDLERRITSGEKDVVL
LGATGTGKSATTAWLIERVQRPTLVLEPNKTLAAQMANELRGFFPDNAVEYFVSYYDYYQ
PEAYVPQTDTYIEKDSSINEDVERLRHSATSNLLSRRDCVVVSSVSCIYGLGTPQSYLDR
SIPLEIGGEIDRDVFLRALVDVQYTRNDIAFARGTFRVRGDTVEIIPAYEELAVRVEFFG
DEIDRLHYLHPLTGEIVREVRDLRIFPATHYVAGPDRMEKAIRGIEAELEEQLGKLEKQN
KLLEAQRLRMRTQYDIEMMRQVGFCSGIENYSRHIDDRPAGSAPATLIDYFPDDFLLVID
ESHYTVPQIGGMYEGDASRKRTLVEHGFRLPSALDNRPLTFEEFSDRIGQTVYLSATPGP
YEMAQAGGEFVEQVIRPTGLIDPEVIVKPTEGQIDDLVHEIRERADRNERVLVTTLTKKM
AEDLTDYLLELGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLIGINLLREGLDLPEVSLV
SILDADKEGFLRSGTSLVQTIGRAARNVSGQVHMYADRITDSMQHAIDETNRRRAKQTAY
NEEHGIDPQPLRKKIADILDRVYSESEDTEESVAVGGSGRNVSRGKKPTGEAVASAGLLA
DRDIKSMPRAELADLVQQLNDQMMNAARELQFELAARLRDEIHDLKKEIRGMDAAGIK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggcattcgcgactgagcaccccgtcctggcccaatccgagttccggccggtcagcgac
attccgcggatcgacggccggttccgcatggtcagcgactacgagccggctggcgaccag
ccgcaggcgatcgaagacctggagcggaggatcacctccggcgagaaggatgtagtgctg
ctcggcgccaccggcaccggcaagtcggcgaccaccgcctggctgatcgagcgcgtccag
cggcccaccctggtgctggagccgaacaagacgctggccgcccagatggccaacgaactg
cgtggcttcttccccgacaacgccgtcgagtacttcgtcagctactacgactactaccaa
cccgaggcgtacgtcccccagaccgacacctacatcgagaaggactcgtcgatcaacgag
gacgtcgagcggttgcgtcactccgccacgtcgaacctgctcagccgccgcgactgcgtg
gtcgtctcgtcggtgtcctgcatctacggcctgggcaccccgcagtcgtacctggaccgg
tccatcccactggagatcggtggcgagatcgaccgggacgtgttcctgcgcgcgctggtg
gacgtgcaatacacccgcaacgacattgccttcgcccgcggcaccttccgggtgcgcggc
gacaccgtagagatcatcccggcttacgaggagctcgcggtgcgcgtggagttcttcggc
gacgagatcgaccggctgcactacctgcacccgctgaccggcgagatcgtgcgcgaggtg
cgcgacctgcggatcttcccggcgacgcactacgtggccggcccggaccggatggagaag
gccatccgcggcatcgaggccgagctggaggagcagctgggcaagctggagaagcagaac
aaactgctcgaggcgcagcggctgcggatgcgcacccagtacgacatcgagatgatgcgc
caggtcgggttctgctccggcatcgagaactactcccggcacatcgacgaccgcccggcc
ggttcggcgccggcgacgctgatcgactacttcccggacgacttcctgctggtcatcgac
gagtcgcactacacggtgccgcagatcggcggcatgtacgagggcgacgcgtcccgcaag
cggaccctggtcgagcacggcttccggctgcccagcgcgctggacaaccggccgctgacc
ttcgaggaattcagcgaccggatcggccagacggtgtacctgtcggcgacgccggggccg
tacgagatggcgcaggccggcggcgagttcgtcgagcaggtgatccgcccgaccgggctg
atcgaccccgaggtgatcgtcaagcccaccgagggccagatcgacgacctggtgcacgag
atccgggagcgcgccgaccgcaacgagcgggtgctggtcaccacgttgaccaagaagatg
gccgaggacctcaccgactacctgctcgaactgggcatccgggtgcggtatctgcactcc
gaggtcgacaccctgcggcgggtcgagctgctgcggcagctacgcctgggggagtacgac
gtgctgatcggcatcaacctgctgcgcgagggcctggacctgccggaggtctccctggtg
tcgatcctggacgccgacaaggagggattcctgcgctccggcaccagcctggtgcagacg
atcggccgcgcggcccggaacgtgtccggccaggtgcacatgtacgcggaccggatcacc
gactcgatgcagcacgccatcgacgagaccaaccggcgccgcgccaagcagacggcctac
aacgaagaacacggcatcgatccgcagccgctgcgcaagaagatcgccgacatcctggac
cgggtgtactccgagtcggaggacaccgaggagtcggtggccgtcggcggttctggccgc
aacgtctcgcgcggcaagaagccgaccggggaggccgtggccagcgccgggctgctggcg
gaccgcgacatcaagtcgatgccgcgcgccgagctggcggacctggtccagcagctcaac
gaccagatgatgaacgcggcccgcgagttgcagttcgagctggccgcgcggctgcgcgac
gagatccacgacctcaagaaggaaatccggggcatggacgccgcaggcatcaagtga
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