Streptomyces actuosus: DMT42_28540
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Entry
DMT42_28540 CDS
T08084
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sact
Streptomyces actuosus
Pathway
sact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DMT42_28540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sact03019
]
DMT42_28540
03016 Transfer RNA biogenesis [BR:
sact03016
]
DMT42_28540
Enzymes [BR:
sact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DMT42_28540
Messenger RNA biogenesis [BR:
sact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DMT42_28540
Transfer RNA biogenesis [BR:
sact03016
]
Prokaryotic type
tRNA degradation factors
DMT42_28540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH_2
DUF2017
Cauli_AT
KhpA-B_KH
Motif
Other DBs
NCBI-ProteinID:
AWT45850
UniProt:
A0A2U9P7Y2
LinkDB
All DBs
Position
6143759..6145972
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AA seq
737 aa
AA seq
DB search
MENETHYAEAVIDNGAFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKQPKDQ
LDFFPLTVDVEERMYAAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQV
VCTVMALNPDHLYDVVAINAASASTQLAGLPFSGPIGGVRVALIRGQWVAFPTHTELEDA
VFDMVVAGRVLEDGDVAIMMVEAEATEKTIQLVEGGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLASKAAKPVGEFPIFLDYQDDVLEALTAAVKPELAQALTIAGKQEREAELDRVKQ
LAAEKLLPEFEGREKEISAAYRSLTKQLVRERVIKEKVRIDGRGVTDIRTLAAEVEAIPR
VHGSAVFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALVPVLPTREEFPYAIRQVSEALSSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIEGETHYVTLTDILGAEDAFGDMDFKVAGTKEFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDRPDEMSPHAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPSAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGQKVQVEIAEIDSRGKLSL
VPVIEGEDDEQKDDTDQ
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaggccgtcatcgacaacggcgccttcggcacccgc
accatccgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtggcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcctccaagcagcccaaggaccag
ctcgacttcttcccgctgacggtcgacgtcgaggagcggatgtacgccgccggcaagatc
cccggcagcttcttccgccgtgagggccggccgagcgaggacgcgatcctcacctgccgc
ctcatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccaggtc
gtctgcacggtcatggccctcaaccccgaccacctgtacgacgtcgtggcgatcaacgcc
gcgtccgcgtccacgcagctggccggcctgcccttctccggcccgatcggcggcgtccgc
gtcgcgctgatccgcggccagtgggtggccttcccgacgcacaccgagctcgaggacgcc
gtcttcgacatggtcgtcgcgggccgcgtcctggaggacggcgacgtcgcgatcatgatg
gtcgaggccgaggccaccgagaagaccatccagctggtcgagggcggcgccgaggcgccc
accgaggaggtcgtcgccgccggtctggaggccgcgaagcccttcatcaaggtcctctgc
aaggcccagtcggacctcgcctccaaggccgccaagccggtcggcgagttcccgatcttc
ctggactaccaggacgacgtgctggaggccctgaccgccgcggtcaagccggagctggcc
caggcgctcaccatcgccggcaagcaggagcgcgaggccgagctggaccgcgtcaagcag
ctcgccgccgagaagctcctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctcaccaagcagctggtccgcgagcgcgtgatcaaggagaaggtgcgcatc
gacggacgcggtgtcaccgacatccgcacgctggccgccgaggtcgaggccatcccgcgg
gtccacggttccgcggtgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgccctcgccgagcgcgccctggtcccggtcctgccg
acgcgtgaggagttcccctacgcgatccgccaggtgtccgaggcgctcagctcgaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctgaaggcccccgtcgccggtatcgccatgggcctgatctcccaggagatcgagggcgag
acgcactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaaggagttcgtcaccgccctccagctcgacaccaagctggac
ggcatccccgcctcggtcctcgccgcggccctcaagcaggcccgcgacgcgcgtctgcac
atcctcgacgtgatgatggaggccatcgaccggcccgacgagatgagcccgcacgccccg
cggatcatcaccgtcaagatcccggtcgacaagatcggtgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacacgggcgccgagatcaccatcgaggacgacggc
acgatctacatcggtgccgccgacggtccctcggcggaggccgcccgcgccacgatcaac
ggcatcgccaacccgacgatgcccgaggtcggcgagcgctacctgggcacggtcgtgaag
acgaccaccttcggcgccttcgtctccctgctgcccggcaaggacggtctgctgcacatc
tcgcagatccgcaagctggccggcggcaagcgcgtggagaacgtcgaggacgtcctcggc
gtcggccagaaggtccaggtcgagatcgccgagatcgactcccgcggcaagctgtcgctg
gtcccggtcatcgagggcgaggacgacgagcagaaggacgacaccgaccagtga
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