Shewanella aestuarii: HBH39_09740
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Entry
HBH39_09740 CDS
T06921
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
saes
Shewanella aestuarii
Pathway
saes02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HBH39_09740 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
saes02000
]
HBH39_09740 (msbA)
Enzymes [BR:
saes01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HBH39_09740 (msbA)
Transporters [BR:
saes02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HBH39_09740 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
DEAD
AAA_29
nSTAND3
AAA_22
ABC_ATPase
AAA_16
AAA_23
NB-ARC
AAA_15
G-alpha
Motif
Other DBs
NCBI-ProteinID:
QIR14734
UniProt:
A0A6G9QJJ0
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All DBs
Position
PN3F2:complement(2162861..2164660)
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AA seq
599 aa
AA seq
DB search
MSSPKNEMWTVFKRLMTYVVPMKGMFIMAVLGLLTYGAVDAGFIAFIKPFIDEGFGSNAT
TVAGVDVPTHGGFNSDNKVLMLAPLVVMGMFILRGLANFVSTYCISYMSAKLIMDMRQQV
FEHYLRLPVSYIDRENSGNLISRVTFDTEQIARASGSALISIVRDSITIIGMLAIMFFYS
WKLSLCILVIGPVMGVVISVVSKRFRKVSKQIQSAMGGVTAATEQMIKGHKNVLSFGGQQ
TEIERFYKVNNANRYQNMKLAVAQSVSQPLIMVIGSFALAFVLYAASWDSMKSELTAGTF
AAILGAMLAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTAPESDNGTHTVERAQGHLQF
KNVTFSYPEQDRKALDNIEFEVKPGKTVALVGRSGSGKSTIASLITRFYGGLSEGDILLD
DTSIYDYQLKNLRDQVALVSQQVTLFNDTIANNIAYAYPGDVTREQIIKAAELAYAMEFI
DALPEGLDTQVGENGVLLSGGQRQRIAIARAMLRDAPVLILDEATSALDTESEKAIQKGL
DNLRHNRTSIVIAHRLSTIESADEILVIDQGSIIERGVHKDLIMQQGVYANLYQMQFGH
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcacccaaaaatgaaatgtggaccgtttttaaacgcttaatgacttatgttgtc
cccatgaaaggtatgtttatcatggccgtattaggcctgttaacttatggcgctgttgat
gctggttttattgcctttattaaaccattcattgatgaaggttttggttctaatgcaaca
acggttgctggagtagatgttccaactcacggcggttttaactccgataacaaggtgttg
atgttagcgcctctagttgtcatggggatgttcattctaaggggcttagcaaactttgtt
tctacctattgcatatcatatatgagcgctaagttgattatggacatgcgtcagcaagtg
ttcgaacattatcttcgcttaccggttagttatatcgaccgtgaaaacagtggtaattta
atctcacgcgtgacctttgatactgaacaaattgctcgtgcatcaggaagtgcgttaatt
tcaattgtaagagactcaattaccatcataggcatgttggcgattatgtttttttattcc
tggaaattgtctttgtgtattttggttatcgggccagtaatgggtgtggtgatcagtgtt
gtcagtaagcgttttcgtaaggtatctaagcaaattcagtcagcaatgggcggggtaact
gctgcgacagaacaaatgatcaaaggccataaaaatgtattatcttttggcggtcaacaa
actgagatagaacgtttttataaagttaataacgctaaccgatatcaaaatatgaagctt
gctgtggcgcaatcagttagtcagccgcttattatggtgattggttcttttgcgttggct
tttgtgttgtatgcagccagttgggatagcatgaaatcagaattgaccgctggtacattt
gcggcaattttgggtgcaatgttagctatgttacagcctattaaaaacttaacccgtgtt
aatgctgaatttcagcgaggtatagcagcctgtaccacagtgtttgagctgttagatacg
gcacccgaatcagataatggaactcatacggttgaacgtgctcaaggccacttacaattt
aaaaacgttacctttagctatcctgaacaagatagaaaagcattagataatatcgaattt
gaagtgaagccagggaaaacggttgcgctggttggccgctctggatcaggtaaatctact
attgccagtttaattacgcgcttttatggtggtttatctgaaggcgatattttactcgat
gacaccagtatttatgactatcagctgaaaaacttgcgcgatcaagtggcgttagtatca
caacaagtgacactgtttaacgacactattgccaataacattgcttacgcttatccaggt
gatgtcacccgagagcaaattattaaagccgctgagttggcctatgcaatggagtttatt
gatgctttaccagaaggtttagatacgcaagtgggtgaaaacggcgtattactttcaggt
ggtcagcgtcagcgtattgccatcgctcgtgccatgctacgtgatgccccagtattgatt
ttagatgaagcgacttcagcattggatactgagtctgaaaaggcaatccaaaagggctta
gataatcttcgccataatcgtacttcaattgtgattgcccaccgtttatcaacgattgaa
tctgccgatgaaattttagtgatcgatcaaggttcaattattgaacgcggggtacacaaa
gacttaattatgcagcagggtgtttacgctaacctatatcaaatgcaatttggtcattaa
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