KEGG   Shewanella aestuarii: HBH39_17505
Entry
HBH39_17505       CDS       T06921                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
saes  Shewanella aestuarii
Pathway
saes03030  DNA replication
saes03430  Mismatch repair
saes03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:saes00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HBH39_17505
   03430 Mismatch repair
    HBH39_17505
   03440 Homologous recombination
    HBH39_17505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:saes03032]
    HBH39_17505
   03400 DNA repair and recombination proteins [BR:saes03400]
    HBH39_17505
Enzymes [BR:saes01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HBH39_17505
DNA replication proteins [BR:saes03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HBH39_17505
DNA repair and recombination proteins [BR:saes03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HBH39_17505
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 HTH_IclR
Other DBs
NCBI-ProteinID: QIR16045
UniProt: A0A6G9QPQ0
LinkDB
Position
PN3F2:complement(4024336..4024944)
AA seq 202 aa
MPLANTAIVLDFETTGLSPDMGDRAIEIGAVKIVDGKIVDNFQALMNPGRRVNSFIESYT
GISNAMLAKAEPCEVVMQRFADFCQNFNLVAHNASFDKKFLDAEFKRINHHYQGQFACSL
LLSRRISQQAPNHKLATLVEYHQLSTDGLFHRALADATMTGHLWLQQLSHIEQHCKKPLS
FDAIMKLTRVPKAQIYRYLTQL
NT seq 609 nt   +upstreamnt  +downstreamnt
atgccacttgccaataccgcaatcgtactcgactttgaaaccacaggcctatcacctgat
atgggggaccgtgccatagaaattggcgcggtaaaaatagttgatggtaaaattgttgat
aattttcaagcattaatgaatccaggtcgccgagtaaatagctttatcgaaagctataca
ggcattagtaatgcaatgttagcaaaagcagaaccttgcgaagtcgtcatgcaacgcttt
gctgatttttgccaaaactttaacttagtcgcccacaatgccagctttgataaaaagttt
ttagatgccgaatttaagcggatcaatcatcactatcagggacaatttgcctgttcattg
ttattgtctagacggatcagccaacaagcgcccaaccataaattagccactttagttgaa
tatcatcaattatcgacagatggcctttttcaccgtgcgctagccgatgccaccatgaca
ggtcatttgtggttacaacagctcagccatattgaacaacactgtaaaaaaccactcagc
tttgatgccataatgaaattaactcgggtacccaaagcacaaatataccgttatttaacg
cagttatag

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