Shewanella aestuarii: HBH39_17505
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Entry
HBH39_17505 CDS
T06921
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
saes
Shewanella aestuarii
Pathway
saes03030
DNA replication
saes03430
Mismatch repair
saes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HBH39_17505
03430 Mismatch repair
HBH39_17505
03440 Homologous recombination
HBH39_17505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saes03032
]
HBH39_17505
03400 DNA repair and recombination proteins [BR:
saes03400
]
HBH39_17505
Enzymes [BR:
saes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HBH39_17505
DNA replication proteins [BR:
saes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HBH39_17505
DNA repair and recombination proteins [BR:
saes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HBH39_17505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QIR16045
UniProt:
A0A6G9QPQ0
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All DBs
Position
PN3F2:complement(4024336..4024944)
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AA seq
202 aa
AA seq
DB search
MPLANTAIVLDFETTGLSPDMGDRAIEIGAVKIVDGKIVDNFQALMNPGRRVNSFIESYT
GISNAMLAKAEPCEVVMQRFADFCQNFNLVAHNASFDKKFLDAEFKRINHHYQGQFACSL
LLSRRISQQAPNHKLATLVEYHQLSTDGLFHRALADATMTGHLWLQQLSHIEQHCKKPLS
FDAIMKLTRVPKAQIYRYLTQL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgccacttgccaataccgcaatcgtactcgactttgaaaccacaggcctatcacctgat
atgggggaccgtgccatagaaattggcgcggtaaaaatagttgatggtaaaattgttgat
aattttcaagcattaatgaatccaggtcgccgagtaaatagctttatcgaaagctataca
ggcattagtaatgcaatgttagcaaaagcagaaccttgcgaagtcgtcatgcaacgcttt
gctgatttttgccaaaactttaacttagtcgcccacaatgccagctttgataaaaagttt
ttagatgccgaatttaagcggatcaatcatcactatcagggacaatttgcctgttcattg
ttattgtctagacggatcagccaacaagcgcccaaccataaattagccactttagttgaa
tatcatcaattatcgacagatggcctttttcaccgtgcgctagccgatgccaccatgaca
ggtcatttgtggttacaacagctcagccatattgaacaacactgtaaaaaaccactcagc
tttgatgccataatgaaattaactcgggtacccaaagcacaaatataccgttatttaacg
cagttatag
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