Streptococcus agalactiae ILRI005: MSA_18320
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Entry
MSA_18320 CDS
T02704
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sagi
Streptococcus agalactiae ILRI005
Pathway
sagi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sagi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSA_18320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sagi03400
]
MSA_18320
DNA repair and recombination proteins [BR:
sagi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSA_18320
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MSA_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_22
AAA_21
AAA_33
AAA_23
nSTAND3
AAA_18
Viral_helicase1
AAA_14
ATPase
NACHT
MMR_HSR1
SLFN-g3_helicase
cobW
T2SSE
BCA_ABC_TP_C
NB-ARC
DUF87
DUF4350
DnaJ_CXXCXGXG
MeaB
IIGP
NTPase_1
YobI-ATPase
DUF463
Septin
PRK
Dynamin_N
PapD_C
Motif
Other DBs
NCBI-ProteinID:
CCW40688
LinkDB
All DBs
Position
complement(1695112..1697940)
Genome browser
AA seq
942 aa
AA seq
DB search
MQDKLMIRGARAHNLKNISVDIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGNMEKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVDKVLALPERTKMQILAPIIRRKKGQHKSTFEKIQKDGYVRVRI
DGDIHDVTEVPELSKSKMHNIDIVVDRLINKDGIRSRLFDSVEAALRLSDGYVVIDTMDG
NELLFSEHYSCPECGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDIDLVIPDKSKTL
REGALVPWNPISSNYYPTMLEQAMTQFGVDMDTPFEKLSKAEQDLALYGSGEREFHFHYI
NDFGGERNIDLPFEGVVNNINRRYHETNSDYTRNVMREYMNELKCNTCHGYRLNDQALCV
RVGGEEGLNIGQVSDLSIADHLELLETLRLSSNEQLIARPIIKEIHDRLSFLNNVGLNYL
NLSRSAGTLSGGESQRIRLATQIGSNLSGVLYVLDEPSIGLHQRDNDRLIDSLKKMRNLG
NTLIVVEHDEDTMMAADWLIDVGPGAGAFGGEIVASGTPKQVAKNTKSITGQYLSGKKVI
PVPSERRVGNGRFLEIKGAAENNLQNLDVKFPLGKFIAVTGVSGSGKSTLINSILKKAVA
QKLNRNSDKPGKYVSLEGIEYVDRLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAQTNE
AKIRGYKKGRFSFNVKGGRCESCSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY
KEKNIAQILDMTVNDAVTFFAAIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHADDIARLLKVLDRFVDDGNTVLVIEHNLDVIKTADH
IIDLGPEGGIGGGQIVAIGTPEEVAENPKSYTGYYLKEKLAR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaattaatgataagaggagcaagagctcacaatttaaaaaatataagtgtc
gacattccacgagacaagttagttgtcgttacgggactatcaggatcaggtaagtctagt
ttggcctttgacactatttatgcagaaggacaacgtcgttacgttgaaagcctttctgct
tatgcgcgccaatttttgggaaatatggaaaagcctgatgtagattctattgatggtctt
agtccagctatttctattgatcagaaaacaacaagtaagaatcctcgctctactgttggg
actgtaacagaaattaacgattatttacgtttgctttatgctcgtgttggaactccatat
tgtatcaatggtcacggagccatcacagcatcttctgtagagcaaattgtggataaggta
ctagcgcttccagagcgaacaaagatgcaaattttagccccaattatacgtcgaaaaaaa
ggacaacacaaatcaacatttgagaaaatacaaaaagatggctacgttcgtgttcgtatt
gatggcgatattcacgatgttactgaggtgcctgaattatcaaaaagtaagatgcacaat
attgatattgtagtagatcgattaattaataaagatggcattcgttcccgcttatttgat
tccgttgaagcggctctacgtttgtcggatggttatgtcgttattgatacaatggatggt
aatgagttattgttttcagagcattattcttgtcctgaatgtggttttactgttcctgaa
ttagagccacgccttttttcttttaatgctccctttggttcttgtccgacctgtgatggc
ttaggaattaagttagaagtggatatagatttggttattccagataaaagcaagaccctt
agagaaggggccttagttccttggaatccaatttcatcaaattattatccaacgatgcta
gagcaagctatgactcaatttggtgttgatatggatacgccatttgaaaaattaagcaag
gcggagcaggatctagccctatatggttcaggcgaacgagagttccatttccattatatt
aacgattttggaggcgagagaaatattgatttgccttttgaaggggttgtcaataatatt
aatcgtcgttaccatgaaactaatagcgattacacacgcaatgttatgcgagaatatatg
aacgagctaaaatgtaacacttgtcatggctatcgtctcaatgatcaagcactttgcgta
agagttgggggagaagaaggtcttaatattggccaagtctcagatttatcgatagcagac
catttagaacttttagaaacgttgcgtttatcttcaaatgaacaattaattgctcgacca
attatcaaagaaatccatgaccgcctaagcttcttaaataatgttgggcttaattattta
aatctgtcacgttctgcaggaacgctttccgggggcgagagtcaacgtattcgtttggct
actcaaattgggtctaatttatcaggtgtcctttatgtacttgatgaaccgtccattgga
cttcatcagcgagacaatgaccgtttgattgatagtcttaagaaaatgcgtaatttgggt
aatacgcttattgttgttgaacatgatgaagatacaatgatggcagctgattggttaatc
gatgtgggacctggcgctggtgcgtttggtggtgagattgtggcctctggcacaccgaag
caagtagctaaaaatactaaatctattacaggacaatatttgtcaggtaagaaagtgatt
cctgtgccatctgaacgaagagtaggcaatggtcgctttttagaaatcaaaggtgcggca
gaaaacaacctacaaaatttagatgtcaagttccctctcggtaaatttattgccgtaact
ggtgtctcaggttctggaaaatcaaccttaattaatagtattttgaaaaaagctgttgcg
cagaagcttaaccgtaactcagataaaccaggtaaatatgtttctttagaaggcattgaa
tatgttgatcgattgattgatattgaccaaagtccaattggtcggaccccacgttctaat
cccgcaacctatacaggtgtttttgatgatattcgtgatctttttgctcaaactaatgag
gcaaaaattcgaggttataaaaaaggacgcttctcatttaacgtcaaaggtggacgttgt
gagtcttgttctggtgatggtatcatcaaaattgagatgcattttttaccagatgtctac
gttccttgtgaagtatgccacggcacgcgctataatagtgagactctggaagtacattac
aaagaaaaaaatattgcacaaattcttgatatgacagtgaatgatgcagttacatttttt
gcagctatccctaaaattgctcgtaagttacagactattaaggatgttggtttgggatat
gtcactttggggcaaccagctacaaccttatcaggaggagaagctcagcgaatgaagctg
gcaagtgaattacataagcgttcaacaggtaagagtctttacatattagacgaaccaaca
acggggcttcatgcagatgatattgctcgtttacttaaggttttggatcgttttgtagat
gatggtaatacagtgcttgttattgagcataaccttgatgttattaaaactgctgaccac
attattgatcttggccctgaaggaggtattggtggcggacaaattgtagctatcggaaca
ccagaagaagttgctgaaaatcctaaatcctatacaggatattatttaaaagagaagtta
gcaagatag
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