KEGG   Streptococcus agalactiae ILRI005: MSA_3720
Entry
MSA_3720          CDS       T02704                                 
Name
(GenBank) Hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
sagi  Streptococcus agalactiae ILRI005
Pathway
sagi03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sagi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MSA_3720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sagi03019]
    MSA_3720
Messenger RNA biogenesis [BR:sagi03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MSA_3720
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 KH_PNO1_2nd HDOD KH_NusA_2nd KH_2 KH_KhpA-B dUTPase KH-I_KHDC4-BBP
Other DBs
NCBI-ProteinID: CCW39249
LinkDB
Position
308130..309737
AA seq 535 aa
MFNIILAMVCALIGLIIGYVAISMKMKSSKEAAELTLLNAEQDAVDLRGKAEIEAEHIRK
AAERESKAHQKELLLEAKEEARKYREEIEKEFKSDRQELKQMEARLTDRASSLDRKDENL
SNKEKMLDSKEQSLTDKSRHINEREQEIATLETKKVEELSRIAELSQEEAKDIILADTEK
DLAHDIATRIKEAEREVKDRSNKIAKDLLAQAMQRLAGEYVTEQTITTVHLPDDNMKGRI
IGREGRNIRTLESLTGIDVIIDDTPEVVVLSGFDPIRREIARMTLESLIQDGRIHPARIE
ELVEKNRLEMDQRIREYGEAAAYEIGAPNLHPDLIKIMGRLQFRTSYGQNVLRHSVEVGK
LAGILAGELGENVDLARRAGFLHDMGKAIDREVEGSHVEIGMEFARKYKEHPIVVNTIAS
HHGDVEPDSVIAVIVAAADALSSARPGARNESMENYIKRLRDLEEIANGFEGVQNAFALQ
AGREIRIMVQPGKVSDDQVVIMSHKVREKIEQNLDYPGNIKVTVIREMRAVDFAK
NT seq 1608 nt   +upstreamnt  +downstreamnt
atgtttaatattatattagcaatggtttgtgcactcattggtttgattattggttatgtg
gctatttcaatgaaaatgaaatcatcaaaagaggctgcagaactaactcttttaaatgca
gaacaagatgccgttgatttacgtggtaaagcagaaattgaagcagaacacatccgtaaa
gcagcggaacgtgaaagtaaagctcaccaaaaagaattacttttagaagcaaaagaagag
gctagaaaatatcgtgaagagatcgaaaaggaatttaaatctgatagacaagagttgaaa
cagatggaggcacgtttaacagatcgtgcatcatctcttgatcgtaaagatgaaaatcta
tctaacaaagaaaaaatgttagatagcaaagaacaaagtctaaccgataaatctagacat
attaatgagcgcgaacaggaaattgctactttagaaacaaaaaaagtagaagaattgtca
cgcatcgcagagcttagtcaagaagaagctaaagatatcattttagctgataccgaaaaa
gatttagctcatgatattgcgacacgtattaaagaagcagaacgtgaagtaaaagatcga
tcaaacaagatagcaaaagacttgctagcccaagctatgcaacgtttagctggtgaatat
gttactgaacaaacaattacaactgttcatctccctgatgataatatgaagggacgtatc
attggtcgtgaaggacgcaatattcgtactctggaaagtttgacaggtattgatgttatc
atagatgatacgccagaagtcgttgttttatcaggtttcgaccccattcgtcgtgaaatt
gctcgtatgactttagaatctttgattcaagatggacgtatccatccagctcgtattgaa
gagttggttgaaaaaaatcgtttggaaatggatcaacgtatccgtgagtatggtgaggca
gcagcttatgagattggtgcaccaaatctgcatcctgatttgataaaaattatgggacgt
ttgcagttccgtacatcatatggtcaaaatgtacttcgtcattcagttgaagttggtaaa
cttgcaggtattttagctggagaactaggagaaaatgttgatttagctcgtcgggctggc
ttcctccatgatatggggaaagctattgatcgcgaagttgaaggcagtcacgttgaaatt
ggtatggaatttgctcgtaagtacaaagagcatccgattgttgttaatactattgcaagc
caccatggtgatgtagaacctgacagcgttattgcagtaattgttgctgctgcagacgcc
cttagttcagcacgaccaggtgcgcgtaatgaatcaatggagaattatatcaaacgtctg
cgtgatttagaagaaattgctaatggctttgagggagtgcaaaatgcctttgcacttcaa
gccggacgtgaaattcgtatcatggtacaacctggtaaagtttctgatgatcaagtggtt
attatgtcgcataaggtacgtgaaaaaatcgaacaaaacttggattatccaggtaatatt
aaggtaacagttattcgtgaaatgcgagctgttgattttgcaaaataa

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