Streptococcus agalactiae CJB111: ID870_08620
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Entry
ID870_08620 CDS
T08770
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
sagj
Streptococcus agalactiae CJB111
Pathway
sagj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sagj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ID870_08620 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagj03021
]
ID870_08620 (rpoB)
03400 DNA repair and recombination proteins [BR:
sagj03400
]
ID870_08620 (rpoB)
Enzymes [BR:
sagj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ID870_08620 (rpoB)
Transcription machinery [BR:
sagj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ID870_08620 (rpoB)
DNA repair and recombination proteins [BR:
sagj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ID870_08620 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QOW76458
LinkDB
All DBs
Position
178975..182550
Genome browser
AA seq
1191 aa
AA seq
DB search
MAGHEVQYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDAGLKEVFEDVLPISNFTD
TMDLEFVGYELKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDAKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGDSELVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLVARFFDPRRYDLAAVGRYKINKKLNLKTRLLNQTIAENLV
DGETGEILAEAGTVMTRDVIDSIAEHIDGDLNKFVYTPNDYAVVTEPVILQKFKVVAPTD
PDRVVTIVGNSNPEDKVRALTPADILAEMSYFLNLAEGIGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNEVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRSTGAVTNEIVWLTADEEDEFTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFPSSIVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAKHDGRVIFSDAEKVEVRREDGSLDVYHVQKFRRSNSGTAY
NQRTLVKVGDLVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEDSLRDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGVVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWETVQEAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDVMHVDDLEKARVKQEAEEKQAEQVSEVVQED
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcagtacggaaaacaccgtacacgtcgtagcttttcaagaatt
aaggaagttcttgatttaccaaacttaattgaaattcaaactgattcattccaagatttt
cttgatgctggcttgaaagaagtatttgaggatgtacttccaatttcaaactttacagat
actatggatcttgaatttgttggttatgaattaaaagaacctaaatatactttggaagaa
gctcgtatccatgatgctagctactcagcacctatttttgttactttccgtttagttaat
aaagaaactggtgaaattaaaactcaagaagttttctttggtgattttccaattatgact
gaaatgggtactttcatcatcaatggtggtgaacgtatcattgtttcacaattagtccgt
tctcctggtgtttactttaatgataaggtagataaaaatggaaaagttggttatgggtca
actgttatccctaaccgcggagcttggttggaacttgagacagacgcaaaagatattgct
tatacacgtattgaccgcacacgtaaaattccattcacaacactagtccgtgcacttggt
ttctctggagacgatgaaattgttgacatctttggtgacagtgaacttgttcgcaatact
attgaaaaagacattcataaaaatccaagtgattctcgtacagatgaagcacttaaagaa
atctatgaacgtcttcgtccaggtgaaccaaaaactgcagacagctcacgtagtctttta
gttgcacgtttctttgatccacgtcgttatgacttagcggctgttggtcgttataagatt
aataaaaaactgaatcttaaaacacgcctattgaaccaaacaatcgctgaaaatttagtt
gatggtgaaacaggagagattcttgctgaagctggaaccgttatgacacgagatgtcatt
gattcaattgcagagcatatcgatggagacttaaacaagtttgtctacacaccaaatgat
tatgctgtagttactgaaccagttattcttcaaaaattcaaagttgttgctccaactgat
ccagaccgtgttgttactattgttggaaactcaaatcctgaagataaagttcgtgcctta
actcctgcagatattttagcagagatgtcatacttcttaaaccttgcagagggtatcggt
aaggtagatgacattgaccatttaggtaaccgtcgtattcgtgcagttggtgaattactt
gcgaaccaattccgtatcggacttgctcgtatggaacgcaatgtccgcgaacgtatgtct
gtacaagacaatgaagtcttgacacctcaacaaatcattaacattcgtccagtgactgcc
gccgttaaagaattctttggttcatcacagctgtcacaattcatggaccaacacaaccct
ctatcagaattgtcgcacaaacgccgtctctctgccttaggacctggtggtttgacacgt
gaccgtgctggatatgaagttcgtgacgtgcactatacccactatgggcgcatgtgtccg
attgaaacacctgaaggtccaaacattggtttgattaataacttatcttcatttggacac
ctcaataaatatggatttattcaaacaccatatcgtaaagtagatcgttctactggtgcg
gtaacgaacgaaattgtttggttgactgctgatgaagaagatgaatttacagttgcacaa
gccaactctaagcttaacgaagacggtacatttgcagaagaaatcgttatgggtcgtcat
caaggtaataaccaagagtttccttcaagcattgttgactttgttgacgtgtcacctaag
caagtagttgctgtcgcaacagcatgtattcctttcttggaaaatgatgactctaaccgt
gccttgatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggagtatcaagcagcccacgattcaggtgcagctgtgattgct
aaacatgatggtcgtgttattttttcagatgctgaaaaagttgaagtgcgtcgcgaagat
ggttctcttgatgtttatcatgttcaaaaattccgccgttcaaactcaggtactgcttat
aaccaacgtaccttagttaaagttggtgatctcgttgaaaaaggtgattttatcgccgac
ggaccatctatggaaaatggtgaaatggctcttggacaaaacccagttgttgcttatatg
acttgggaaggttataacttcgaggatgccgttatcatgagtgagcgccttgtgaaagaa
gatgtctatacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaagctt
gggcctgaagaaattactcgtgaaattccaaatgttggtgaagattcactacgtgatctc
gatgaaatgggaattatccgcattggtgctgaggtaaaagaaggtgacattcttgttggt
aaggtaacacctaagggtgaaaaggacttatctgctgaagaacgtctcttgcatgccatt
tttggtgataaatcacgtgaagttcgtgatacttcactacgtgtacctcacggtggcgat
ggagtagttcgtgacgttaaaatctttactcgtgcaaatggtgatgaattgcaatcaggt
gttaatatgcttgtccgcgtttatatcgctcaaaaacgtaaaatcaaagtcggtgataag
atggccggtcgtcacggaaacaaaggtgtcgtctcacgtattgttcctgttgaagatatg
ccttacttaccagatggaacgccagttgatatcatgttgaacccacttggggtgccatca
cgtatgaatatcggacaagttatggagcttcatttaggtatggctgctcgtaatttaggt
attcatattgcaacgccagtctttgatggggcttcttcagaagacctttgggaaactgtt
caagaagcaggtatggattcagatgctaagactgttctttatgatggtcgtactggtgaa
ccattcgataaccgtgtgtcagttggtgtcatgtacatgatcaaacttcaccacatggtt
gatgataaacttcatgcccgttcagtaggaccatactcacttgttactcaacaaccactt
ggaggtaaagctcaatttggtggacaacgttttggtgagatggaggtttgggcgcttgaa
gcttatggtgcttcaaatgttcttcaagaaattttaacatacaaatctgatgatgttaca
ggacgtcttaaagcttatgaagctatcacaaaaggtaagccaattccaaaaccaggtgtt
ccagaatcattccgtgttcttgtaaaagaattgcaatcacttggtcttgatatgcgtgtc
cttgatgaagatgacaacgaagttgaactccgtgatcttgatgaaggtgaagatgatgat
gtgatgcacgttgatgaccttgaaaaagcacgtgtgaaacaagaagctgaagaaaaacaa
gctgaacaagtatctgaagtcgttcaagaagattaa
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integrated database retrieval system
