Streptococcus agalactiae CNCTC 10/84: W903_1442
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Entry
W903_1442 CDS
T03518
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sagn
Streptococcus agalactiae CNCTC 10/84
Pathway
sagn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sagn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
W903_1442 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sagn03021
]
W903_1442 (rpoD)
Transcription machinery [BR:
sagn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
W903_1442 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
Motif
Other DBs
NCBI-ProteinID:
AIX05112
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All DBs
Position
complement(1371381..1372490)
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AA seq
369 aa
AA seq
DB search
MAEKKGNTTFNVQVADFIRNHKKQGTAIDDEVTEKLVIPFVLDADQIDDLLERLTDGGIS
ITDKEGNPSTKYVVEGPKPEELTDEELIGSNSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
AVAVAEGDLMAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQL
DEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSRS
KQLKDFMED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaaaaggaaatacaacttttaatgttcaagttgcggattttattcgcaat
cataaaaaacaaggtactgcaattgatgatgaggtaacagaaaaacttgttattcctttt
gttttagatgcagatcaaattgatgatttgttagaacgattgacagacggtggcatttca
atcacagataaagaaggcaatccttcaacaaagtatgtggtagaagggccaaaacctgaa
gaattgactgatgaagagctcataggaagtaattctgctaaagtcaatgacccagtacgt
atgtacttgaaggaaattggtgttgttcctcttttaacgaatgaagaagaaaaagaattg
gctgttgcggttgctgagggagatttaatggctaaacaacgtttagctgaagcaaacctt
cgtcttgttgtctcaattgcaaaacgttatgttggacgtggaatgcaatttcttgattta
attcaagagggtaacatggggctcatgaaagctgttgataaatttgattattcaaaggga
ttcaaattttcaacttatgcaacatggtggattcgtcaagctataacacgtgcaattgca
gatcaagcacgtacgattcgtattcctgttcatatggttgaaacgattaataaattggtc
cgtgaacaacgtaatcttcttcaagaacttggtcaagatccaactcctgagcaaatcgca
gaacgcatggatatgacaccagataaagtacgcgaaatcctaaaaattgctcaagagccg
gtatcgctagaaacgccaatcggtgaggaagatgatagccatttgggtgatttcattgaa
gacgaagttattgaaaatccagtagattatactacacgtgttgttcttcgtgagcaatta
gatgaggttttagatactcttactgaccgtgaagagaatgttcttcgtttacgctttggt
cttgacgatggtaaaatgcgtacgttagaggacgtaggtaaagtatttaatgttactcgt
gagcgcattcgtcagattgaagctaaagcccttagaaaacttcgccatcctagtcgtagc
aagcaacttaaagatttcatggaagattga
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