Streptomyces akebiae: K1J60_38535
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Entry
K1J60_38535 CDS
T08702
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sakb
Streptomyces akebiae
Pathway
sakb00040
Pentose and glucuronate interconversions
sakb01100
Metabolic pathways
sakb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sakb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
K1J60_38535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K1J60_38535
Enzymes [BR:
sakb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
K1J60_38535
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
QYX81681
UniProt:
A0ABX8Y2U5
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Position
8855025..8856020
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AA seq
331 aa
AA seq
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MRSSSRTVSALTLALLLAAATPVEAGTAAAAPPAPLAETSPTGFAAVHALGQNGTTGGAG
GTTVTATTTEQFLEYIDTTAPLVIRVQGTIDITSKQGVRPNKTIIGVGSSAVINGGGLEF
YRSSNVIVRNIKFTAAEDDAISVGRESHHIWIDHNEFVAPLDGAVDVVRAAEYVTVSWNW
FNKTDKSMLLGHSDGNGSQDTGKLKVSIHHNFFDGSRQRHPRVRFGEPVHVYNNYYKGNA
VYGVASTMNAGVVVEGNHFEGVPHPCHSASGYDASGPGRLVQRNNVFTGSGTCETNGTVV
EPRTYYAYTLDPAADVPALVRAGAGTGKIGA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgtcgtcacgcacggtttccgcactcacgctcgccctgctgctcgccgccgcc
acgcccgtcgaggccgggacggccgccgccgcgccgccggcacccctggcggagacgtcc
cccaccggcttcgccgccgtccacgcgctcggacagaacggcaccaccggcggggccggc
ggcaccaccgtcaccgccaccaccaccgagcagttcctggagtacatcgacaccacggcc
ccgctggtcatccgggtccagggcacgatcgacatcaccagcaaacagggcgtccgcccg
aacaagaccatcatcggggtcggttcctcggccgtcatcaacggcggcggcctggagttc
taccgctcctccaacgtcatcgtgcgcaacatcaagttcaccgcggccgaggacgacgcc
atcagcgtgggccgggagtcccaccacatctggatcgaccacaacgagttcgtcgccccg
ctcgacggagcggtcgacgtggtccgcgccgccgagtacgtcaccgtctcctggaactgg
ttcaacaagaccgacaagagcatgctgctcgggcactccgacggcaacggcagccaggac
accgggaagttgaaggtctcgatccaccacaacttcttcgacggctcacggcagcgacac
ccccgggtccggttcggcgagccggtgcacgtctacaacaactactacaagggcaacgcc
gtctacggcgtcgcctcgacgatgaacgcgggcgtcgtcgtcgagggcaaccacttcgag
ggcgtcccccacccctgccactccgcgagcggctacgacgcctcgggaccgggccgactg
gtccagcggaacaacgtcttcaccgggtccggcacgtgcgagaccaacggcacggtcgtc
gagccccgcacgtactacgcgtacacgctggaccccgccgcagacgtcccggccctcgta
cgggccggggcaggcaccggaaagatcggtgcctga
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