Salinibacterium sp. UTAS2018: ESZ53_13945
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Entry
ESZ53_13945 CDS
T05816
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
sala
Salinibacterium sp. UTAS2018
Pathway
sala03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sala00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ESZ53_13945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sala03019
]
ESZ53_13945
03009 Ribosome biogenesis [BR:
sala03009
]
ESZ53_13945
Messenger RNA biogenesis [BR:
sala03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ESZ53_13945
Ribosome biogenesis [BR:
sala03009
]
Prokaryotic type
rRNA helicases
ESZ53_13945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
UvrA_inter
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QAV71442
UniProt:
A0A410YLZ7
LinkDB
All DBs
Position
complement(2934145..2936055)
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AA seq
636 aa
AA seq
DB search
MTDSDSTAPSETTETAITFSDLALSDAVLKAVRDIGYETPSAIQAATIPTLLEGRDVVGL
AQTGTGKTAAFALPILSRLDVSQSKPQALVLSPTRELALQVCEAFEKYATHMRGVHVLPV
YGGQAYGVQLSALRRGVHVVVGTPGRIMDHLAKGTLDLSELKYLVLDEADEMLKMGFAED
VETILADTPDDKQVALFSATMPAQIRRISKKYLNNAEEITVKAKTTTSANTSQRYLIVSY
PQKVDALTRILEVENFEGMIIFVRTKSETENLAEKLRARGYSAAAISGDVAQAQRERTVN
QLKSGKLDILVATDVAARGLDVDRISHVVNFDIPVDTESYVHRIGRTGRAGRSGSAISFV
TPRERRLLTAIEKATRQPLTQMQLPSVEDVNSTRLTRFDDAITEALNQQPRITAFREIIA
HYVEHHDIPEADVAAALAVVAQGDTPLLLSAEEERAQRFAERDERKARTDRPERSGDRGG
ERGDRPERRPRSTKPMAAYRIEVGKRQRVEPRQIVGALANEGGLSRDDFGHIQIRPDFSL
VELPADMSKDVLERLRDTRISGKLIEIAPDRKANGGGARSAGDKYPSRDRSFEGGARANR
EREASRGYNNRDSDSSGGGRESGGSYDDRPKRKPRY
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaccgattctgattcaaccgcaccgtctgaaaccaccgagaccgcgatcactttctcc
gacctcgctctcagcgatgcggtattgaaagcggtccgcgacattggctacgagacgccg
tcggctatccaagcagccactatccctactcttctggaagggcgcgacgtagtcggcctg
gcccagaccggcacgggaaagaccgcagctttcgcgctgccgattctctcgcgcctcgat
gtatcccagagcaagcctcaagcgctcgtgctctcccccacccgcgaactcgcgttgcag
gtgtgtgaggcattcgagaagtacgccacccacatgcgtggcgtgcacgtgctccccgtc
tatggcggacaggcctatggcgttcagctgtcggcgctgcgccgcggcgttcacgttgtt
gtcggtactcccggccgcatcatggaccacctcgccaagggcaccctcgacctctctgag
ctcaagtacctcgttctcgatgaggccgacgagatgctcaagatgggtttcgccgaagac
gttgagacgatcctcgccgacaccccggatgacaagcaggttgcactcttctccgcgacg
atgccggcccagatccgccgcatctccaagaagtacctcaacaacgctgaagagatcact
gtcaaggccaagaccactacgtcggccaacacctcgcagcgctacctgatcgtgtcctac
ccgcaaaaggtggatgctctcacccgcatcctcgaggtcgaaaacttcgaaggcatgatc
attttcgttcgcacgaagagcgaaaccgagaacctcgcagagaagttgcgcgcccgtggt
tactccgcggccgcgatcagcggtgacgttgctcaggctcagcgtgagcgcaccgtcaac
cagctcaagtcgggcaagctcgacatcctggtagcaactgacgttgccgctcgtggactc
gacgtcgaccgcatcagccacgtcgtgaacttcgacatccccgttgacaccgagtcgtac
gtgcaccgcatcggtcgcacgggtcgcgccggtcgcagcggttcggctatcagctttgtc
actcctcgcgagcgtcgcctgctgaccgccatcgagaaggccacgcgccagccgctcacg
caaatgcagcttccttcggttgaagacgtcaactccacgcgtctcacgcgcttcgacgac
gccatcaccgaagcgctcaaccagcagccacgcatcaccgcgttccgcgagatcatcgct
cactacgttgaacaccacgatattcctgaagcggatgttgctgcggcgcttgccgtcgtg
gctcagggtgatactcccctgttgctttcggctgaagaagaacgcgcccagcgtttcgca
gagcgtgatgagcgcaaggcacgcaccgatcgccccgagcgtagtggcgaccgtggcgga
gagcgtggcgatcgccccgagcgccgcccgcgttccacgaagcccatggccgcgtaccgt
atcgaggttggcaagcgccagcgcgttgagccccgccagattgttggcgcactagccaac
gaaggtggactcagccgtgacgacttcggccacattcagattcgcccggacttctcgctc
gtcgagttgcctgccgacatgtcgaaagatgtgctcgagcgtctgcgtgacactcgcatc
agcggcaagctgattgagatcgcaccggaccgcaaggccaacggcggcggagcacgttcc
gctggcgacaagtacccgagccgtgaccgctcattcgaaggtggcgcccgcgccaaccgc
gaacgtgaagcatcgcgcggttacaacaaccgagacagtgacagcagcggcggcggtcgc
gaaagcggcggcagctacgacgatcgtcccaagcgcaagcctcgctactag
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