Streptomyces albidoflavus: XNR_4912
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Entry
XNR_4912 CDS
T02545
Name
(GenBank) Excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
salb
Streptomyces albidoflavus
Pathway
salb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
salb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XNR_4912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
salb03400
]
XNR_4912
DNA repair and recombination proteins [BR:
salb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XNR_4912
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XNR_4912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_21
AAA_29
RsgA_GTPase
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_33
AAA_22
APS_kinase
NACHT
Viral_helicase1
cobW
HC2
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
AGI91233
LinkDB
All DBs
Position
5586039..5589044
Genome browser
AA seq
1001 aa
AA seq
DB search
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPVCHRPISRQSPQAIVDKVLGLPEGSRFQVLSPLVRERKGEFVDLFADLQAKGYSRARV
DGTTVQLSDPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKEYFGRLVGALADALNFRTDVPFAALPQRAKKALLQGHKTQ
IEVRYRNRYGRERVYTTAFEGAVPYVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRLK
PIVLAVTVMGKSIAEVSAMSITDCADFLDKLTLSGRDLKIAERVLKEVNERLRFLVDVGL
DYLSLNRPAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLDELLANKESITGQYLAGK
RSIPVPEIRRPVDPARQLTVIGAKENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGAKSVPGRHTRVEGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDNVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCHGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALGFFEAVPTIARHLRTLNEVGLGYVRLGQPAPTLSGGEAQ
RVKLAAELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNSVIVIEHNLDVIK
TADWVVDMGPEGGNGGGLVVAEGTPEEVAGVPASHTGKFLQDVLGADRISEASAAPRSGG
ARKTGATRKAVAAKKPAAKKAAAKKTAAKKAPAKKAPRTTK
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggtgcccgcgagcacaatctgaggaatgtctcgctc
gacctgccgcgtgactccctcatcgtcttcaccgggctctccgggtcgggcaagtcctcg
ctcgcgttcgacacgatcttcgccgagggccagcggcggtacgtcgagtccctctcctcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctc
tcgcccgcggtctccatcgaccagaagtccacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactacctccgcctgctcttcgcccggatcggcaagccgcac
tgcccggtctgccaccgcccgatctcccgccagtcgccgcaggccatcgtggacaaggtg
ctgggcctgcccgagggcagccgcttccaggtgctctccccgctggtccgtgagcgcaag
ggcgagttcgtcgacctcttcgccgacctccaggccaaggggtacagccgcgcccgcgtc
gacggcaccacggtccagctctccgacccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtcaaggagagcgccaagcgccgcctcaccgac
tcggtggagaccgccctcggcctctccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcggatgtactccgagcacctctactgcccgtacgac
gacctctccttcgaggagctggagccgcgctccttctccttcaactcgccgttcggcgcc
tgccccgactgcaccggcatcggcacccgcatggaggtcgacccggagctgatcgtcccg
gacgaggacaagtccctggacgagggcgccatccacccctggtcgcacgggcacaccaag
gagtacttcggccggctggtcggcgccctcgccgacgcgctgaacttccgcaccgacgtg
cccttcgccgcgctcccgcagcgcgcgaagaaggccctgctccagggccacaagacccag
atcgaggtccgctaccgcaaccgctacggccgcgagcgggtctacaccaccgccttcgag
ggcgccgtgccctacgtcaagcggcgccactccgaggcggagagcgactccagccgggag
cggttcgaggggtacatgcgggaggtcccctgcccgacctgcgaggggacccgactcaag
ccgatcgtgctggcggtcacggtgatgggcaagtccatcgccgaggtctccgccatgtcg
atcaccgactgcgccgacttcctcgacaagctcaccctctccggccgcgacctcaagatc
gccgagcgcgtcctcaaggaggtcaacgaacgcctccgcttcctggtcgacgtcggcctc
gactacctctccctcaaccgcccggcgggctccctctccggcggtgaggcccagcgcatc
cggctggccacccagatcggctccggcctggtcggcgtgctctacgtcctggacgagccc
tcgatcggcctccaccagcgcgacaaccaccggctgatcgagaccctggtccgcctgcgc
gacatgggcaacaccctgatcgtggtggagcacgacgaggacaccatcaaggtcgccgac
tggatcgtggacatcggcccgggcgccggtgagcacggcggcaaggtcgtccactccggt
tcgctggacgagctgctcgccaacaaggagtcgatcaccggccagtacctcgccggcaag
cgttccatcccggtgccggagatccgccgcccggtcgacccggcgcggcagctgacggtg
atcggtgccaaggagaacaacctccgcgacatcgacgtctccttcccgctcggcgtcctc
accgccgtcaccggagtctccggctccggcaagtcgacgctggtcaacgacatcctctac
acccacctggcccgcgagctgaacggcgccaagagcgttcccggccgtcacacccgggtc
gagggcgacgacctcgtcgacaaggtcgtgcacgtcgaccagtcgccgatcggccgcacc
ccccgctccaacccggccacgtacaccggcgtcttcgacaacgtccgcaagctcttcgcc
gagacgatggaggccaaggtccgcgggtacctccccggccgcttctccttcaacgtcaag
ggcggccgctgcgagaactgccacggcgacggcaccatcaagatcgagatgaacttcctg
cccgacgtgtacgtcccctgcgaggtctgccacggggcgcgctacaaccgggagaccctg
gaggtccactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctcggcttcttcgaggcggtccccaccatcgcccgccacctgcgcacgctcaacgaggtc
ggcctcgggtacgtccgcctcggacagcccgcgccgaccctctccggcggcgaggcgcag
cgcgtcaagctcgccgccgagctgcagaagcgctccaccgggcgcacggtctacgtcctg
gacgagcccaccaccggcctgcacttcgaggacatcagcaagctgatcaccgtcctctcc
ggtctggtcgacaagggcaactcggtcatcgtgatcgagcacaacctcgacgtgatcaag
accgccgactgggtcgtcgacatgggccccgagggcggcaacggcggcggcctggtcgtc
gccgaaggcacccccgaggaggtggccggcgtccccgccagccacaccggcaagttcctc
caggacgtcctcggcgccgaccggatcagcgaggcctcggccgcgccccgctccggcggt
gcccgcaagacgggggccacccgcaaggcggtcgcggccaagaagcccgccgcgaagaag
gcggcggccaagaagacggcggccaagaaggccccggcgaagaaggcaccgcgcaccacc
aagtga
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