KEGG   Streptomyces albidoflavus: XNR_4912
Entry
XNR_4912          CDS       T02545                                 
Name
(GenBank) Excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
salb  Streptomyces albidoflavus
Pathway
salb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:salb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    XNR_4912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salb03400]
    XNR_4912
DNA repair and recombination proteins [BR:salb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XNR_4912
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      XNR_4912
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_21 AAA_29 RsgA_GTPase AAA_16 nSTAND1 DnaJ_CXXCXGXG AAA_33 AAA_22 APS_kinase NACHT Viral_helicase1 cobW HC2 ExoX-like_C
Other DBs
NCBI-ProteinID: AGI91233
LinkDB
Position
5586039..5589044
AA seq 1001 aa
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPVCHRPISRQSPQAIVDKVLGLPEGSRFQVLSPLVRERKGEFVDLFADLQAKGYSRARV
DGTTVQLSDPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVVLDFVDL
PEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCTGIGTRMEVDPELIVP
DEDKSLDEGAIHPWSHGHTKEYFGRLVGALADALNFRTDVPFAALPQRAKKALLQGHKTQ
IEVRYRNRYGRERVYTTAFEGAVPYVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRLK
PIVLAVTVMGKSIAEVSAMSITDCADFLDKLTLSGRDLKIAERVLKEVNERLRFLVDVGL
DYLSLNRPAGSLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSLDELLANKESITGQYLAGK
RSIPVPEIRRPVDPARQLTVIGAKENNLRDIDVSFPLGVLTAVTGVSGSGKSTLVNDILY
THLARELNGAKSVPGRHTRVEGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDNVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCHGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALGFFEAVPTIARHLRTLNEVGLGYVRLGQPAPTLSGGEAQ
RVKLAAELQKRSTGRTVYVLDEPTTGLHFEDISKLITVLSGLVDKGNSVIVIEHNLDVIK
TADWVVDMGPEGGNGGGLVVAEGTPEEVAGVPASHTGKFLQDVLGADRISEASAAPRSGG
ARKTGATRKAVAAKKPAAKKAAAKKTAAKKAPAKKAPRTTK
NT seq 3006 nt   +upstreamnt  +downstreamnt
gtggccgaccgtctcatcgtccgtggtgcccgcgagcacaatctgaggaatgtctcgctc
gacctgccgcgtgactccctcatcgtcttcaccgggctctccgggtcgggcaagtcctcg
ctcgcgttcgacacgatcttcgccgagggccagcggcggtacgtcgagtccctctcctcg
tacgcccggcagttcctcggccagatggacaagcccgacgtcgacttcatcgagggcctc
tcgcccgcggtctccatcgaccagaagtccacctcgcgcaacccgcgctccacggtcggc
accatcaccgaggtctacgactacctccgcctgctcttcgcccggatcggcaagccgcac
tgcccggtctgccaccgcccgatctcccgccagtcgccgcaggccatcgtggacaaggtg
ctgggcctgcccgagggcagccgcttccaggtgctctccccgctggtccgtgagcgcaag
ggcgagttcgtcgacctcttcgccgacctccaggccaaggggtacagccgcgcccgcgtc
gacggcaccacggtccagctctccgacccgccgaagctgaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtcaaggagagcgccaagcgccgcctcaccgac
tcggtggagaccgccctcggcctctccggcggcatggtcgtgctcgacttcgtcgacctc
cccgaggacgaccccgagcgcgagcggatgtactccgagcacctctactgcccgtacgac
gacctctccttcgaggagctggagccgcgctccttctccttcaactcgccgttcggcgcc
tgccccgactgcaccggcatcggcacccgcatggaggtcgacccggagctgatcgtcccg
gacgaggacaagtccctggacgagggcgccatccacccctggtcgcacgggcacaccaag
gagtacttcggccggctggtcggcgccctcgccgacgcgctgaacttccgcaccgacgtg
cccttcgccgcgctcccgcagcgcgcgaagaaggccctgctccagggccacaagacccag
atcgaggtccgctaccgcaaccgctacggccgcgagcgggtctacaccaccgccttcgag
ggcgccgtgccctacgtcaagcggcgccactccgaggcggagagcgactccagccgggag
cggttcgaggggtacatgcgggaggtcccctgcccgacctgcgaggggacccgactcaag
ccgatcgtgctggcggtcacggtgatgggcaagtccatcgccgaggtctccgccatgtcg
atcaccgactgcgccgacttcctcgacaagctcaccctctccggccgcgacctcaagatc
gccgagcgcgtcctcaaggaggtcaacgaacgcctccgcttcctggtcgacgtcggcctc
gactacctctccctcaaccgcccggcgggctccctctccggcggtgaggcccagcgcatc
cggctggccacccagatcggctccggcctggtcggcgtgctctacgtcctggacgagccc
tcgatcggcctccaccagcgcgacaaccaccggctgatcgagaccctggtccgcctgcgc
gacatgggcaacaccctgatcgtggtggagcacgacgaggacaccatcaaggtcgccgac
tggatcgtggacatcggcccgggcgccggtgagcacggcggcaaggtcgtccactccggt
tcgctggacgagctgctcgccaacaaggagtcgatcaccggccagtacctcgccggcaag
cgttccatcccggtgccggagatccgccgcccggtcgacccggcgcggcagctgacggtg
atcggtgccaaggagaacaacctccgcgacatcgacgtctccttcccgctcggcgtcctc
accgccgtcaccggagtctccggctccggcaagtcgacgctggtcaacgacatcctctac
acccacctggcccgcgagctgaacggcgccaagagcgttcccggccgtcacacccgggtc
gagggcgacgacctcgtcgacaaggtcgtgcacgtcgaccagtcgccgatcggccgcacc
ccccgctccaacccggccacgtacaccggcgtcttcgacaacgtccgcaagctcttcgcc
gagacgatggaggccaaggtccgcgggtacctccccggccgcttctccttcaacgtcaag
ggcggccgctgcgagaactgccacggcgacggcaccatcaagatcgagatgaacttcctg
cccgacgtgtacgtcccctgcgaggtctgccacggggcgcgctacaaccgggagaccctg
gaggtccactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctcggcttcttcgaggcggtccccaccatcgcccgccacctgcgcacgctcaacgaggtc
ggcctcgggtacgtccgcctcggacagcccgcgccgaccctctccggcggcgaggcgcag
cgcgtcaagctcgccgccgagctgcagaagcgctccaccgggcgcacggtctacgtcctg
gacgagcccaccaccggcctgcacttcgaggacatcagcaagctgatcaccgtcctctcc
ggtctggtcgacaagggcaactcggtcatcgtgatcgagcacaacctcgacgtgatcaag
accgccgactgggtcgtcgacatgggccccgagggcggcaacggcggcggcctggtcgtc
gccgaaggcacccccgaggaggtggccggcgtccccgccagccacaccggcaagttcctc
caggacgtcctcggcgccgaccggatcagcgaggcctcggccgcgccccgctccggcggt
gcccgcaagacgggggccacccgcaaggcggtcgcggccaagaagcccgccgcgaagaag
gcggcggccaagaagacggcggccaagaaggccccggcgaagaaggcaccgcgcaccacc
aagtga

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